RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 HOXA6P31267 233 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GEMP55040 296 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 WNT3AP56704 352 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 SEMG2Q02383 582 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 CCDC15Q0P6D6 951 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GPS1Q13098 491 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GALNT3Q14435 633 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 SPARCL1Q14515 664 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 BRAT1Q6PJG6 821 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 KBTBD6Q86V97 674 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 MNS1Q8NEH6 495 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 RMDN1Q96DB5 314 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 RUNDC3BQ96NL0 473 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 MLPHQ9BV36 600 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 USP36Q9P275 1121 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ASIC3Q9UHC3 531 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ITM2BQ9Y287 266 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 AAR2Q9Y312 384 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GOLGA6CA6NDK9 693 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GOLGA6BA6NDN3 693 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 TTI1O43156 1089 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 HTRA2O43464 458 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GOLGA6DP0CG33 693 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 CTPS1P17812 591 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ITIH2P19823 946 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 FAM193AP78312 1265 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 CDK18Q07002 472 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 SRSF5Q13243 272 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 MPP3Q13368 585 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 UGP2Q16851 508 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 AGBL4Q5VU57 503 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 CCDC70Q6NSX1 233 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 USP30Q70CQ3 517 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 WDR5BQ86VZ2 330 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 SLC25A41Q8N5S1 370 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ECHDC3Q96DC8 303 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 TOE1Q96GM8 510 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 PPP1R2P1Q96PQ5 205 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 APOL2Q9BQE5 337 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 FICDQ9BVA6 458 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ADGRE3Q9BY15 652 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 HDAC8Q9BY41 377 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 BTBD1Q9H0C5 482 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 VPS45Q9NRW7 570 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 GOLGA6AQ9NYA3 693 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 DKK3Q9UBP4 350 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 PCYOX1Q9UHG3 505 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 CTAGE15A4D2H0 777 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 A8MX80 341 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 UPK3BL1B0FP48 263 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 UPK3BL2E5RIL1 263 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 H0Y858 1186 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 MAP3K13O43283 966 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 USP12O75317 370 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 CTAGE8P0CG41 777 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 TIMP2P16035 220 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 CD6P30203 668 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 ACSL1P33121 698 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 FDFT1P37268 417 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 ABL2P42684 1182 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 POLR2LP62875 67 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 OLIG2Q13516 323 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 PIP5KL1Q5T9C9 394 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 ERAP2Q6P179 960 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 KDELC1Q6UW63 502 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 CTAGE6Q86UF2 777 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 JAMLQ86YT9 394 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 CTAGE4Q8IX94 777 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 TADA1Q96BN2 335 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 LRRC45Q96CN5 670 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
VIPAS39-208ENST00000556412 CHD5Q8TDI0 1954 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 CCDC163A0A0D9SF12 145 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 A0A1W2PQ67 120 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 NDUFS2O75306 463 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 RPP40O75818 363 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PCDH8O95206 1070 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 AGTP01019 485 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 APRTP07741 180 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ALPIP09923 528 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 OXTRP30559 389 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ADCY8P40145 1251 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PTGIRP43119 386 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 NUBP1P53384 320 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ADPRHP54922 357 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 DHX34Q14147 1143 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PTPRRQ15256 657 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 MAP7D1Q3KQU3 841 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 C4orf22Q6V702 233 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ZNF572Q7Z3I7 529 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 DEFB119Q8N690 84 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 HCAR2Q8TDS4 363 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 MRGPRX2Q96LB1 330 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 SMIM14Q96QK8 99 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TRIM51Q9BSJ1 452 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 CARD6Q9BX69 1037 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms