RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OR7A2PQ8NGA2 310 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 C19orf60Q96EN9 201 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 PCDHAC1Q9H158 963 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 F7P08709 466 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 ADORA2AP29274 412 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 PEBP4Q96S96 227 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 NXF3Q9H4D5 531 aaKnown RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 GLOD4Q9HC38 313 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 RNASEH1O60930 286 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 GSNP06396 782 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 IDO1P14902 403 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 MAXP61244 160 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC10A6Q3KNW5 377 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CLEC6AQ6EIG7 209 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SPESP1Q6UW49 350 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 BNIPLQ7Z465 357 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 MILR1Q7Z6M3 343 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 HDAC10Q969S8 669 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SIGLEC10Q96LC7 697 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 RHOBTB2Q9BYZ6 727 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ACTR8Q9H981 624 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 INVSQ9Y283 1065 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SH3GLB1Q9Y371 365 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 C5orf58C9J3I9 102 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC22A2O15244 555 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SEC22BO75396 215 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ITGB6P18564 788 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 JAK1P23458 1154 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SOX6P35712 828 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 WNT3AP56704 352 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 NAA20P61599 178 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 PCLAFQ15004 111 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 PLEKHG4Q58EX7 1191 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDCA2Q69YH5 1023 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 GLT6D1Q7Z4J2 308 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ABCC13Q9NSE7 274 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 IGSF9Q9P2J2 1179 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 STX16-NPEPL1H3BU86 382 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 GPR182O15218 404 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ENDOD1O94919 500 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ATG7O95352 703 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 HSMCR30P0CW71 290 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDH3P22223 829 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 RPL26P61254 145 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SFSWAPQ12872 951 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 MAD2L1Q13257 205 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 FSCN1Q16658 493 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 VPS26BQ4G0F5 336 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 TIFABQ6ZNK6 161 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CAND1Q86VP6 1230 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ADHFE1Q8IWW8 467 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 GAD1Q99259 594 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 APOL4Q9BPW4 351 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 ROGDIQ9GZN7 287 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 SENP6Q9GZR1 1112 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 HPS4Q9NQG7 708 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 OXSMQ9NWU1 459 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 FZD10Q9ULW2 581 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 MYO5AQ9Y4I1 1855 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 LINC00854A0A1B0GVQ3 168 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 PEX10O60683 326 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CPSF4O95639 269 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 MAPK1P28482 360 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM9CQ8IZT9 166 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 NOL6Q9H6R4 1146 aaKnown RBP15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CXorf21Q9HAI6 301 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 DERAQ9Y315 318 aa15.11■□□□□ 0.01
ARHGEF40-207ENST00000556399 KCNH1O95259 989 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PPP3CCP48454 512 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 GSSP48637 474 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ST13P50502 369 aaKnown RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 LSM3P62310 102 aaKnown RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 IL23RQ5VWK5 629 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 TBC1D21Q8IYX1 336 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 SEPT8Q92599 483 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ADGRE3Q9BY15 652 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 POLR1EQ9GZS1 481 aaKnown RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 FZD8Q9H461 694 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 GOLGA2P5Q9HBQ8 144 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 VPS45Q9NRW7 570 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 DPYSL4O14531 572 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 CXCL11O14625 94 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDH5P33151 784 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 TOP3AQ13472 1001 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ARHGEF7Q14155 803 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 VEPH1Q14D04 833 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 TIGD2Q4W5G0 525 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 TMEM63BQ5T3F8 832 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 NCBP2-AS2Q69YL0 99 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 KBTBD2Q8IY47 623 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 SPATA22Q8NHS9 363 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ELOVL6Q9H5J4 265 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 USE1Q9NZ43 259 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 SELENONQ9NZV5 590 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 MYH1P12882 1939 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms