RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CABIN1Q9Y6J0 2220 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TNRC6BQ9UPQ9 1833 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3DA0A087WVF3 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3IA0A087WXS9 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3EA0A087X179 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3KA0A087X1G2 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 A0A1W2PPC4 97 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3FA6NER0 549 aaPredicted RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 FAM47DPA6NHR8 397 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3LB9A6J9 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 WNT9AO14904 365 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 KHNYNO15037 678 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 FSBPO95073 299 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 PIGNO95427 931 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 FTCDO95954 541 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 SERPINF2P08697 491 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CCDC175P0C221 793 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3HP0C7X1 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 PYGMP11217 842 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 PECAM1P16284 738 aaPredicted RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 ITIH2P19823 946 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 MMP13P45452 471 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 NEK3P51956 506 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 RWDD2BP57060 319 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 IRX4P78413 519 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 BNC1Q01954 994 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CCDC15Q0P6D6 951 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 GRM3Q14832 879 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 DUOXA1Q1HG43 343 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 ZNF284Q2VY69 593 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3GQ6DHY5 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 ALG1LQ6GMV1 187 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3CQ6IPX1 549 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 BBS12Q6ZW61 710 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 ZSWIM9Q86XI8 627 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CAMK1DQ8IU85 385 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CCDC13Q8IYE1 715 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TBC1D3Q8IZP1 549 aaPredicted RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CNTD1Q8N815 330 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 CEP76Q8TAP6 659 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 UBE2Q2Q8WVN8 375 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 RAB7BQ96AH8 199 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 PPP1R16AQ96I34 528 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 RBM41Q96IZ5 413 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 NUDCD1Q96RS6 583 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TUBGCP5Q96RT8 1024 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 IL12RB2Q99665 862 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 HINFPQ9BQA5 517 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 HEMGNQ9BXL5 484 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 BRD8Q9H0E9 1235 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 KCNF1Q9H3M0 494 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 NOD2Q9HC29 1040 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 DYRK4Q9NR20 520 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 EVA1BQ9NVM1 165 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 SAE1Q9UBE0 346 aaPredicted RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 TPX2Q9ULW0 747 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 ZFR2Q9UPR6 939 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 ATP8A1Q9Y2Q0 1164 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 PPP2R2CQ9Y2T4 447 aa9.75□□□□□ -0.85
SRP54-210ENST00000556380 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 ATXN2Q99700 1313 aaKnown RBP9.75□□□□□ -0.85
SRP54-210ENST00000556380 DNAH14Q0VDD8 3507 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 A0A1B0GTW7 788 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 A0A1W2PQU0 124 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 LNP1A1A4G5 178 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 MEI4A8MW99 385 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 MIF4GDA9UHW6 222 aaKnown RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 KCNK1O00180 336 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 BCAT2O15382 392 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 HTRA2O43464 458 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 KRT86O43790 486 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 FOXD2O60548 495 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 RNGTTO60942 597 aaKnown RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 JCHAINP01591 159 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 CCNB1P14635 433 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TGM2P21980 687 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 MAPK8P45983 427 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 SCNN1BP51168 640 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 SUOXP51687 545 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 MAXP61244 160 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 AP1S1P61966 158 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 DYNLT1P63172 113 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 NIPAL4Q0D2K0 466 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 FGL2Q14314 439 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 ZNF235Q14590 738 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 PDK1Q15118 436 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 PRKD1Q15139 912 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 ODF2Q5BJF6 829 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TRIM61Q5EBN2 209 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 RALGPS1Q5JS13 557 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 KAZNQ674X7 775 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TIGD7Q6NT04 549 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 AADACL2Q6P093 401 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 FBXL19Q6PCT2 694 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TREML4Q6UXN2 200 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 PEX26Q7Z412 305 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms