RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SLC7A14Q8TBB6 771 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 APBB2Q92870 758 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NKD2Q969F2 451 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 APOPT1Q96IL0 206 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TMEM237Q96Q45 408 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TAAR1Q96RJ0 339 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 LBHD1Q9BQE6 289 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 FERMT1Q9BQL6 677 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SH2D3AQ9BRG2 576 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NTPCRQ9BSD7 190 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TCHPQ9BT92 498 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TEX13BQ9BXU2 312 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MAK16Q9BXY0 300 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TMEM39BQ9GZU3 492 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 HAPLN2Q9GZV7 340 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MAF1Q9H063 256 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MYLK2Q9H1R3 596 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ACAD9Q9H845 621 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RNPEPL1Q9HAU8 725 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ACP6Q9NPH0 428 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SAR1AQ9NR31 198 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ARHGEF3Q9NR81 526 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NRBP2Q9NSY0 501 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CYP39A1Q9NYL5 469 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 KCMF1Q9P0J7 381 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NDOR1Q9UHB4 597 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ANGPTL2Q9UKU9 493 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SUFUQ9UMX1 484 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 AGAP1Q9UPQ3 857 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 A0A0G2JMZ2 1700 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PARP14Q460N5 1801 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 A0A087X1B8 175 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CFAP69A5D8W1 941 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CAPN14A8MX76 684 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 VWA5AO00534 786 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 OGTO15294 1046 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MAGEB2O15479 319 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CCDC22O60826 627 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KRT37O76014 449 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 IL18RAPO95256 599 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ASMTLO95671 621 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PRLP01236 227 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ATP5BP06576 529 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 C1SP09871 688 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KRT10P13645 584 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KCNA2P16389 499 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KLRC2P26717 231 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MARK3P27448 753 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MECP2P51608 486 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ARFIP2P53365 341 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 RAD23BP54727 409 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SH3BGRP55822 239 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 BCAR1P56945 870 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SNX16P57768 344 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 NLRP11P59045 1033 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TAS2R40P59535 323 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 EIF3EP60228 445 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 YWHAGP61981 247 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PSMC1P62191 440 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MXRA7P84157 204 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SPP2Q13103 211 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 BAATQ14032 418 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KRT81Q14533 505 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TBCCQ15814 346 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 STXBP2Q15833 593 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KCTD19Q17RG1 926 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 LRRC26Q2I0M4 334 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SGSM1Q2NKQ1 1148 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 DNAL1Q4LDG9 190 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FNDC3BQ53EP0 1204 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM177Q53S58 311 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TAF1BQ53T94 588 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ANKRD20A2Q5SQ80 823 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 C9orf50Q5SZB4 431 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 UBAP2Q5T6F2 1119 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ANKRD20A1Q5TYW2 823 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FNDC7Q5VTL7 733 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ATG16L1Q676U5 607 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CAPRIN2Q6IMN6 1127 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SPOPLQ6IQ16 392 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SLC39A4Q6P5W5 647 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 DARS2Q6PI48 645 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 LVRNQ6Q4G3 990 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MFSD7Q6UXD7 560 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 C4orf22Q6V702 233 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SCARA5Q6ZMJ2 495 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 C15orf39Q6ZRI6 1047 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SEPT14Q6ZU15 432 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ASRGL1Q7L266 308 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 NLRP9Q7RTR0 991 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 LONP2Q86WA8 852 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CDKL3Q8IVW4 592 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MAP7D3Q8IWC1 876 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 DHX37Q8IY37 1157 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TTC39CQ8N584 583 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CISD2Q8N5K1 135 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 KCTD6Q8NC69 237 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms