RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ANKS1BQ7Z6G8 1248 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 MILR1Q7Z6M3 343 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 B3GNT8Q7Z7M8 397 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SYCP3Q8IZU3 236 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GPD1LQ8N335 351 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 B3GALNT2Q8NCR0 500 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 OR5B17Q8NGF7 314 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 RASSF8Q8NHQ8 419 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 NOC3LQ8WTT2 800 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 KCNE4Q8WWG9 221 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA1Q92805 767 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PIWIL1Q96J94 861 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GDF3Q9NR23 364 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 MAPRE3Q9UPY8 281 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 NME7Q9Y5B8 376 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 A0A087X0B3 334 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TLR4O00206 839 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 NOBOXO60393 691 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 DNAJC6O75061 913 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 GCNT3O95395 438 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 KLKB1P03952 638 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 DNTTP04053 509 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 IGHV4-34P06331 123 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 COL6A2P12110 1019 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 RARGP13631 454 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ACP1P24666 158 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CD38P28907 300 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ATICP31939 592 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SOX5P35711 763 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 MC3RP41968 323 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 PGFP49763 221 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TNNC1P63316 161 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 COG7P83436 770 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TRPC3Q13507 836 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ALCAMQ13740 583 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ARHGAP44Q17R89 818 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TTC31Q49AM3 519 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 PIK3R6Q5UE93 754 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ABHD17CQ6PCB6 329 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 USP30Q70CQ3 517 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TADA2BQ86TJ2 420 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SFR1Q86XK3 245 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CACUL1Q86Y37 369 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 THNSL2Q86YJ6 484 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 WDR49Q8IV35 697 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 NLGN4XQ8N0W4 816 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF276Q8N554 614 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CBWD1Q9BRT8 395 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 PCIF1Q9H4Z3 704 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 MYOTQ9UBF9 498 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 CBLCQ9ULV8 474 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SCML2Q9UQR0 700 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 MYRFQ9Y2G1 1151 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 SPTA1P02549 2419 aa5.03□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA4Q13439 2230 aaKnown RBP5.03□□□□□ -1.6
ATXN3-239ENST00000556315 A0A1W2PR77 199 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ANKRD62A6NC57 917 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 FAM47DPA6NHR8 397 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 K7ENP7 123 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 STC2O76061 302 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 WNT1P04628 370 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 RALAP11233 206 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 TNNI1P19237 187 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CCR5P51681 352 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms