RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KLK6Q92876 244 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 FEM1CQ96JP0 617 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 GDF3Q9NR23 364 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 TM7SF3Q9NS93 570 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ITM2BQ9Y287 266 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 A0A0A6YYK5 440 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-205ENST00000556310 LRRD1A4D1F6 860 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 SOWAHDA6NJG2 315 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 H0Y8X5 98 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 TLR4O00206 839 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 NEMP1O14524 444 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 GIPC1O14908 333 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 MUSKO15146 869 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 YKT6O15498 198 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 FLRT2O43155 660 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 NDUFA10O95299 355 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
SLIRP-205ENST00000556310 KRT1P04264 644 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 KDELR1P24390 212 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 GARSP41250 739 aaKnown RBP11.65□□□□□ -0.54
SLIRP-205ENST00000556310 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 ELP6Q0PNE2 266 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 HNRNPDQ14103 355 aaKnown RBP11.65□□□□□ -0.54
SLIRP-205ENST00000556310 STAT4Q14765 748 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 CFAP58Q5T655 872 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 BRAT1Q6PJG6 821 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 TTC7BQ86TV6 843 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 BBS5Q8N3I7 341 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 OXR1Q8N573 874 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 PQLC3Q8N755 202 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 DENND6BQ8NEG7 585 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 NSMCE1Q8WV22 266 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 ASB12Q8WXK4 309 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 ELF4Q99607 663 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-205ENST00000556310 MYOCQ99972 504 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 MGME1Q9BQP7 344 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 SLC17A9Q9BYT1 436 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 ERVMER34-1Q9H9K5 563 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 FZD3Q9NPG1 666 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
SLIRP-205ENST00000556310 COL5A1P20908 1838 aaPredicted RBP11.65□□□□□ -0.55
SLIRP-205ENST00000556310 A0A1B0GTQ1 180 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 C3orf70A6NLC5 250 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 SPOPO43791 374 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 SH3BP5O60239 455 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 PCDHGA12O60330 932 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 BUB1BO60566 1050 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 TIMP2P16035 220 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 CR2P20023 1033 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 MX2P20592 715 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 COMTP21964 271 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 XPAP23025 273 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 MMP13P45452 471 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 NOP2P46087 812 aaKnown RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 SCNN1BP51168 640 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 GBE1Q04446 702 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 BCL2L1Q07817 233 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 FGL2Q14314 439 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 SUZ12Q15022 739 aaKnown RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 RALGPS1Q5JS13 557 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 LRRC73Q5JTD7 316 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 TIGD7Q6NT04 549 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 KYAT3Q6YP21 454 aaKnown RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 GCNT7Q6ZNI0 430 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 ABI3BPQ7Z7G0 1075 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 CAMK1DQ8IU85 385 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 FAM174AQ8TBP5 190 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 FATE1Q969F0 183 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 RNF157Q96PX1 679 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 NUDCD1Q96RS6 583 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 CA5BQ9Y2D0 317 aa11.64□□□□□ -0.55
SLIRP-205ENST00000556310 EPN1Q9Y6I3 576 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-205ENST00000556310 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 IGLON5A6NGN9 336 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 A6NNZ2 444 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 KCNK3O14649 394 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 SOCS5O75159 536 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 THEGLP0DJG4 465 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 MMP12P39900 470 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 SGCGQ13326 291 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms