RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CLSTN1O94985 981 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 IGLV3-27P01718 113 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FUCA1P04066 466 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 SCG5P05408 212 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 ATP5BP06576 529 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 CDK4P11802 303 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 KRT13P13646 458 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 RPL13P26373 211 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 SHBQ15464 509 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 ZCWPW2Q504Y3 356 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 PIK3R6Q5UE93 754 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 CHST9Q7L1S5 443 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 RSRC2Q7L4I2 434 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FAM129CQ86XR2 697 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 CCDC103Q8IW40 242 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FAM186BQ8IYM0 893 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 KDM1BQ8NB78 822 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 CCDC150Q8NCX0 1101 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FBXL13Q8NEE6 735 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FIBINQ8TAL6 211 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 GOLGA1Q92805 767 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 DACT3Q96B18 629 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 LRIG1Q96JA1 1093 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 EPN3Q9H201 632 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 EBF2Q9HAK2 575 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 ABCC13Q9NSE7 274 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 ABCB8Q9NUT2 735 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 TMEFF2Q9UIK5 374 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 GGA2Q9UJY4 613 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 SCML1Q9UN30 329 aa9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 FLNBO75369 2602 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-204ENST00000556268 BPTFQ12830 3046 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 A0A1B0GVL5 298 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 A0A1W2PPC4 97 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 FAM149AA5PLN7 773 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 IRAK2O43187 625 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 PABPC1P11940 636 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 LIMS1P48059 325 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 BCAT1P54687 386 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 GALCP54803 685 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 GFRA1P56159 465 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 SLC8A3P57103 927 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 EDRF1Q3B7T1 1238 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 FNDC3BQ53EP0 1204 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 FAM133BQ5BKY9 247 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 KIAA0895LQ68EN5 471 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 MSANTD2Q6P1R3 559 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 AHI1Q8N157 1196 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 UBR7Q8N806 425 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 ZNF366Q8N895 744 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 WFDC5Q8TCV5 224 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 SAP25Q8TEE9 199 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 SLC35F5Q8WV83 523 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 PABPC3Q9H361 631 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 CNGB3Q9NQW8 809 aa9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 INTS6Q9UL03 887 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-204ENST00000556268 GOLGA6L7A0A1B0GV03 622 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 A0A1W2PR77 199 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 TARSL2A2RTX5 802 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 FSBPO95073 299 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 DNTTP04053 509 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 WNT1P04628 370 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 NTRK1P04629 796 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 PFKFB1P16118 471 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 POLR2EP19388 210 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 SLC6A4P31645 630 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 CD70P32970 193 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 RXRGP48443 463 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 CCT8P50990 548 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 CCR5P51681 352 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 SGSHP51688 502 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 DAOAP59103 153 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 KCNJ12Q14500 433 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 RTP5Q14D33 572 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 HNRNPA1L2Q32P51 320 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 PRAMEF14Q5SWL7 426 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 C9orf64Q5T6V5 341 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 E4F1Q66K89 784 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 ZNF776Q68DI1 518 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 DHRS13Q6UX07 377 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 TMEM151BQ8IW70 566 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 UNC45BQ8IWX7 931 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 ZNF557Q8N988 423 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 UBA3Q8TBC4 463 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 RNF139Q8WU17 664 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 ALG3Q92685 438 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 EEF2KMTQ96G04 330 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 NEUROG2Q9H2A3 272 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 MTG2Q9H4K7 406 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 PRORYQ9H606 182 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 LRRC4Q9HBW1 653 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 FBXL12Q9NXK8 326 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 TSPAN16Q9UKR8 245 aa9.25□□□□□ -0.93
GTF2A1-204ENST00000556268 AGRPO00253 132 aa9.24□□□□□ -0.93
GTF2A1-204ENST00000556268 O00370 1275 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms