RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HDAC11Q96DB2 347 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 TSGA13Q96PP4 275 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 SLC17A9Q9BYT1 436 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 NOD2Q9HC29 1040 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 PCDH12Q9NPG4 1184 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 TM7SF3Q9NS93 570 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
ACTN1-217ENST00000556203 DMXL1Q9Y485 3027 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 PI4KAP42356 2102 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 DCHS1Q96JQ0 3298 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-217ENST00000556203 TRAFD1O14545 582 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-217ENST00000556203 RAD51BO15315 384 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 MMP20O60882 483 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 KCNK5O95279 499 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 CSRP1P21291 193 aaKnown RBP15.32■□□□□ 0.04
ACTN1-217ENST00000556203 CLDN2P57739 230 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 NXPH1P58417 271 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ITKQ08881 620 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ELP6Q0PNE2 266 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 OVGP1Q12889 678 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 LLGL1Q15334 1064 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ZNF423Q2M1K9 1284 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 PRAMEF14Q5SWL7 426 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 KAZNQ674X7 775 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 PSAPL1Q6NUJ1 521 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ERAP2Q6P179 960 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 NPNTQ6UXI9 565 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 SPOCD1Q6ZMY3 1216 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 IQCHQ86VS3 1027 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 DEFB124Q8NES8 71 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 FATE1Q969F0 183 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ECHDC3Q96DC8 303 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 KLHDC7BQ96G42 594 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 LGMNQ99538 433 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 WRAP53Q9BUR4 548 aaKnown RBP15.32■□□□□ 0.04
ACTN1-217ENST00000556203 C1QTNF2Q9BXJ5 285 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 GDF3Q9NR23 364 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 RBM22Q9NW64 420 aaKnown RBP eCLIP15.32■□□□□ 0.04
ACTN1-217ENST00000556203 TRIM10Q9UDY6 481 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 ATP8A1Q9Y2Q0 1164 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 TTLL3Q9Y4R7 772 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 PCDHGC4Q9Y5F7 938 aa15.32■□□□□ 0.04
ACTN1-217ENST00000556203 DNAH14Q0VDD8 3507 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 A0A0U1RQJ8 604 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 MACROD2A1Z1Q3 448 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 GRID2IPA4D2P6 1211 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 GIPC1O14908 333 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 NEBLO76041 1014 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 ZRANB2O95218 330 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 ZNF883P0CG24 379 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 KRT10P13645 584 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 CCNB1P14635 433 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 CCT8P50990 548 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 IL9RQ01113 521 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 SEMG2Q02383 582 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 PPIDQ08752 370 aaKnown RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 TFDP2Q14188 446 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 TAZQ16635 292 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 TMEM52BQ4KMG9 183 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 RALGPS1Q5JS13 557 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 GCNT7Q6ZNI0 430 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 PIP4P1Q86T03 277 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 SPATS2Q86XZ4 545 aaKnown RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 CCDC50Q8IVM0 306 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 PDCD6IPQ8WUM4 868 aaKnown RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 ELF4Q99607 663 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 SEMA3CQ99985 751 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 POLR1EQ9GZS1 481 aaKnown RBP15.31■□□□□ 0.04
ACTN1-217ENST00000556203 SLC32A1Q9H598 525 aa15.31■□□□□ 0.04
ACTN1-217ENST00000556203 A0A1B0GTQ1 180 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 KCNK1O00180 336 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 HTRA2O43464 458 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 SH3BP5O60239 455 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 DFNA5O60443 496 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 CST8O60676 142 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 MAGEC1O60732 1142 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 PLXNA2O75051 1894 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 SOCS5O75159 536 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 TM7SF2O76062 418 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 HLA-DQB2P05538 268 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 CTNNA1P35221 906 aaKnown RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 MMP12P39900 470 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 POLR2LP62875 67 aaKnown RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 FAM193AP78312 1265 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 DSC2Q02487 901 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 AP1B1Q10567 949 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 TRAF2Q12933 501 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 PDK1Q15118 436 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 TFDP3Q5H9I0 405 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 ABI3BPQ7Z7G0 1075 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms