RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 C10orf88Q9H8K7 445 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 LRRC40Q9H9A6 602 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 RXFP1Q9HBX9 757 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 LTB4R2Q9NPC1 389 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 OLA1Q9NTK5 396 aaKnown RBP6.6□□□□□ -1.35
PSEN1-214ENST00000555867 COMMD8Q9NX08 183 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 MIOSQ9NXC5 875 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 ARHGEF38Q9NXL2 777 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 ZDHHC3Q9NYG2 299 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 BFARQ9NZS9 450 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 USH1CQ9Y6N9 552 aa6.6□□□□□ -1.35
PSEN1-214ENST00000555867 SYNJ2BP-COX16A0A087WUM0 186 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CCDC195A0A1B0GUA6 201 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 OR6C75A6NL08 312 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 NRP1O14786 923 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 B4GALT3O60512 393 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 SPAG7O75391 227 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 BANF1O75531 89 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 OAZ2O95190 189 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RTN3O95197 1032 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TGDSO95455 350 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 METTL18O95568 372 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 AP2A1O95782 977 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 POMCP01189 267 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 FYNP06241 537 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 DHRS4L1P0CG22 281 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 VAV1P15498 845 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CREB1P16220 341 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 BDNFP23560 247 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CCNCP24863 283 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CCR1P32246 355 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RPA3P35244 121 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 HADHAP40939 763 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 BRCC3P46736 316 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 NPY2RP49146 381 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 LIG3P49916 1009 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RASSF2P50749 326 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 NEK3P51956 506 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 SLC5A3P53794 718 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 GAD2Q05329 585 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CDK18Q07002 472 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 GALNT2Q10471 571 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MPP2Q14168 576 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 SF3A2Q15428 464 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MLF2Q15773 248 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ANO4Q32M45 955 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 HP1BP3Q5SSJ5 553 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 BSPRYQ5W0U4 402 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ATG16L1Q676U5 607 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ZNF280DQ6N043 979 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MSANTD2Q6P1R3 559 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 LVRNQ6Q4G3 990 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PARM1Q6UWI2 310 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 DENND5BQ6ZUT9 1274 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ZNF534Q76KX8 674 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 BHLHA9Q7RTU4 235 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 DDX53Q86TM3 631 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TAC4Q86UU9 113 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MON1AQ86VX9 555 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 KLHDC8BQ8IXV7 354 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PYROXD2Q8N2H3 581 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CELF5Q8N6W0 485 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PPM1NQ8N819 430 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 DQX1Q8TE96 717 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 DEPDC1BQ8WUY9 529 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RNF34Q969K3 372 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ZNF707Q96C28 371 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TBC1D31Q96DN5 1066 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TMEM169Q96HH4 297 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 IGSF21Q96ID5 467 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TSGA13Q96PP4 275 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CDK5RAP1Q96SZ6 601 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 KCNK16Q96T55 309 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 LGMNQ99538 433 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PAIP2Q9BPZ3 127 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 SIKE1Q9BRV8 207 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TUBB6Q9BUF5 446 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TKTL2Q9H0I9 626 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ZCWPW1Q9H0M4 648 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 GBA3Q9H227 469 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 FAM96AQ9H5X1 160 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RETREG1Q9H6L5 497 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TXLNGQ9NUQ3 528 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MOCS1Q9NZB8 636 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 COX16Q9P0S2 106 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 KLHL8Q9P2G9 620 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TXNDC16Q9P2K2 825 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 OR12D3Q9UGF7 316 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ADAM28Q9UKQ2 775 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 HCN2Q9UL51 889 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 RAB23Q9ULC3 237 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PHTF1Q9UMS5 762 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 SLC12A4Q9UP95 1085 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 AAR2Q9Y312 384 aaKnown RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-214ENST00000555867 MAD1L1Q9Y6D9 718 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 CAPN7Q9Y6W3 813 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 ITPR1Q14643 2758 aa6.59□□□□□ -1.35
PSEN1-214ENST00000555867 PI4KAP42356 2102 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms