RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SERPINB6P35237 376 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 SCNN1BP51168 640 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 RENBPP51606 427 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 BCL2L1Q07817 233 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 FZD2Q14332 565 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 ZNF235Q14590 738 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 UGP2Q16851 508 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 KDM7AQ6ZMT4 941 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 PARGQ86W56 976 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 SLC25A45Q8N413 288 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 ATPAF2Q8N5M1 289 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 KDF1Q8NAX2 398 aaPredicted RBP18.58■□□□□ 0.56
NEDD1-208ENST00000555806 IFT43Q96FT9 208 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 ZNF599Q96NL3 588 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 CAAP1Q9H8G2 361 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 GPR27Q9NS67 375 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 UCKL1Q9NWZ5 548 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 UVRAGQ9P2Y5 699 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 ZMIZ1Q9ULJ6 1067 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 COQ6Q9Y2Z9 468 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 PCDHGA1Q9Y5H4 931 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 PTPRBP23467 1997 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 SPTY2D1-AS1A0A0U1RR47 76 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 H3BM21 787 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 SIGLEC6O43699 453 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 PRKCGP05129 697 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 IGFALSP35858 605 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 ACADVLP49748 655 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 THOP1P52888 689 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 HNRNPKP61978 463 aaKnown RBP eCLIP18.57■□□□□ 0.56
NEDD1-208ENST00000555806 SLC10A7Q0GE19 358 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 TMEM52BQ4KMG9 183 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 NSMCE1Q8WV22 266 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 ABHD10Q9NUJ1 306 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 ATP8A1Q9Y2Q0 1164 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 USP24Q9UPU5 2620 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 CACNA1BQ00975 2339 aa18.57■□□□□ 0.56
NEDD1-208ENST00000555806 FAM149AA5PLN7 773 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 TMEM110-MUSTN1A8MSY1 372 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 TRIM38O00635 465 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 RIOK3O14730 519 aaKnown RBP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 MUSKO15146 869 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 MFAP3LO75121 409 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 KRT37O76014 449 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 PROSCO94903 275 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 C1SP09871 688 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 ALPPL2P10696 532 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 C6P13671 934 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 CKMT2P17540 419 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 PFN3P60673 137 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 AP1S1P61966 158 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 DAB2P98082 770 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 SEMG2Q02383 582 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 MMRN1Q13201 1228 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 ZNF211Q13398 564 aaPredicted RBP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 ZFYVE27Q5T4F4 411 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 ZSWIM9Q86XI8 627 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 MARCH9Q86YJ5 346 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 CPNE8Q86YQ8 564 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 BBS5Q8N3I7 341 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 OR4C6Q8NH72 309 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 TSC1Q92574 1164 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 CENPTQ96BT3 561 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 PSKH2Q96QS6 385 aa18.56■□□□□ 0.56
NEDD1-208ENST00000555806 RCOR3Q9P2K3 495 aaPredicted RBP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 TDRD6O60522 2096 aaKnown RBP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 KMT2BQ9UMN6 2715 aaPredicted RBP18.56■□□□□ 0.56
NEDD1-208ENST00000555806 ANKRD36A6QL64 1941 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 IGF2RP11717 2491 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 NEMP2A6NFY4 417 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 LZTS3O60299 673 aaPredicted RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 CSF2P04141 144 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 CD48P09326 243 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 CDK4P11802 303 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 NME1P15531 152 aaKnown RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 HSPA9P38646 679 aaKnown RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 MMP12P39900 470 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 ADKP55263 362 aaKnown RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 PTK2BQ14289 1009 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 IRF4Q15306 451 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 SMAD1Q15797 465 aaKnown RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 ASTE1Q2TB18 679 aaPredicted RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 PROX2Q3B8N5 592 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 ATP13A4Q4VNC1 1196 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 TPRG1LQ5T0D9 272 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 TP53I13Q8NBR0 393 aaPredicted RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 KCTD6Q8NC69 237 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 CCDC42Q96M95 316 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 CHP1Q99653 195 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 MBNL1Q9NR56 388 aaKnown RBP18.55■□□□□ 0.56
NEDD1-208ENST00000555806 LCMT1Q9UIC8 334 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 PLXNB3Q9ULL4 1909 aa18.55■□□□□ 0.56
NEDD1-208ENST00000555806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.54■□□□□ 0.56
NEDD1-208ENST00000555806 TTC24A2A3L6 582 aaPredicted RBP18.54■□□□□ 0.56
NEDD1-208ENST00000555806 MAFKO60675 156 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 TMEM253P0C7T8 217 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 JUNDP17535 347 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 LIG3P49916 1009 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms