RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 TUBGCP5Q96RT8 1024 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CINPQ9BW66 212 aaPredicted RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 NLGN3Q9NZ94 848 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 DKK4Q9UBT3 224 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 ASXL3Q9C0F0 2248 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 SCAMP1O15126 338 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 BUB1BO60566 1050 aaPredicted RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 GIMD1P0DJR0 217 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 TCF4P15884 667 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 JUNDP17535 347 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 ARL4AP40617 200 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 RGRP47804 291 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 EIF2B5Q13144 721 aaKnown RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 PIGHQ14442 188 aaPredicted RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 DPYSL2Q16555 572 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 UGP2Q16851 508 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 BRAT1Q6PJG6 821 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 CAMK1DQ8IU85 385 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 TSEN2Q8NCE0 465 aaKnown RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 ZNF548Q8NEK5 533 aaPredicted RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 HSPH1Q92598 858 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 DUSP23Q9BVJ7 150 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 ATP13A3Q9H7F0 1226 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 PCDH12Q9NPG4 1184 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 KLF15Q9UIH9 416 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 LUC7L2Q9Y383 392 aaKnown RBP13.94□□□□□ -0.18
PCNX4-209ENST00000555569 ADAMTS20P59510 1910 aa13.94□□□□□ -0.18
PCNX4-209ENST00000555569 DSPP15924 2871 aaKnown RBP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 A0A087X0T9 212 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 K7ESM1 405 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 TOR1BO14657 336 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 NEBLO76041 1014 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 GYPCP04921 128 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 CYP1A2P05177 515 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 FAM228BP0C875 321 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 RARAP10276 462 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 CKMT1AP12532 417 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 AMPD1P23109 780 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 SERPINA4P29622 427 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 THOP1P52888 689 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 YPEL5P62699 121 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 E2F1Q01094 437 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 TARDBPQ13148 414 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 PTK2BQ14289 1009 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 ERAP2Q6P179 960 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 ALKBH5Q6P6C2 394 aaKnown RBP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 POLNQ7Z5Q5 900 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 NIPA2Q8N8Q9 360 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 FAM181AQ8N9Y4 354 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 TP53I13Q8NBR0 393 aaPredicted RBP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 BTN2A2Q8WVV5 523 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 TEKT4Q8WW24 435 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 APOLD1Q96LR9 279 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 NUP85Q9BW27 656 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 MBNL1Q9NR56 388 aaKnown RBP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCNX4-209ENST00000555569 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 IP6K2Q9UHH9 426 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 ANAPC7Q9UJX3 599 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 ATP8A1Q9Y2Q0 1164 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 COQ6Q9Y2Z9 468 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 CSNK1G3Q9Y6M4 447 aa13.93□□□□□ -0.18
PCNX4-209ENST00000555569 AQP9O43315 295 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 C6P13671 934 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 MMP12P39900 470 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 DUSP3P51452 185 aaPredicted RBP13.92□□□□□ -0.18
PCNX4-209ENST00000555569 RENBPP51606 427 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 INSM1Q01101 510 aaPredicted RBP13.92□□□□□ -0.18
PCNX4-209ENST00000555569 BCL2L1Q07817 233 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCNX4-209ENST00000555569 LRRC14Q15048 493 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 IRF4Q15306 451 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 CCDC122Q5T0U0 273 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 TMCO4Q5TGY1 634 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 TXNRD3NBQ6F5E7 133 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 MACC1Q6ZN28 852 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 ZSWIM9Q86XI8 627 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 PHACTR4Q8IZ21 702 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 CACTIN-AS1Q8N1I8 211 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 LMX1AQ8TE12 382 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 NXPE2Q96DL1 559 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 ZNF599Q96NL3 588 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms