RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DYNC1LI2O43237 492 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 LINC00032P0C843 101 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 PRKCQQ04759 706 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 DPYSQ14117 519 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 TMEM26Q6ZUK4 368 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 RETREG3Q86VR2 466 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 AHI1Q8N157 1196 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 PABPC5Q96DU9 382 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 RHOJQ9H4E5 214 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 CABYRO75952 493 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 BAIAP3O94812 1187 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 H6PDO95479 791 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 NPR3P17342 541 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 NOS2P35228 1153 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 LILRA4P59901 499 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 RABL3Q5HYI8 236 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 STYXQ8WUJ0 223 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 TMEM74Q96NL1 305 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CASS4Q9NQ75 786 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 SMOXQ9NWM0 555 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CHCHD3Q9NX63 227 aaKnown RBP17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 HACD1B0YJ81 288 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 TMEM114B3SHH9 223 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 UBFD1O14562 309 aaKnown RBP17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CNMDO75829 334 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 EMP3P54852 163 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CDK18Q07002 472 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 NSUN2Q08J23 767 aaKnown RBP eCLIP17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CDH17Q12864 832 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 RPS6KA2Q15349 733 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 FGD3Q5JSP0 725 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 STRADAQ7RTN6 431 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 DHFR2Q86XF0 187 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 DTNBP1Q96EV8 351 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 NPY6RQ99463 290 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPR22Q99680 433 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 SLAMF8Q9P0V8 285 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 IGSF9Q9P2J2 1179 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 OAZ3Q9UMX2 235 aa17.18■□□□□ 0.34
PPP4R3A-208ENST00000555462 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 KPNA6O60684 536 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 CTSHP09668 335 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 ARNTP27540 789 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 GRB7Q14451 532 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 MARCH8Q5T0T0 291 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 STXBP5Q5T5C0 1151 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 METTL21CQ5VZV1 264 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 POTEHQ6S545 545 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 FIBCD1Q8N539 461 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 GIPC3Q8TF64 312 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZFRQ96KR1 1074 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 C1orf50Q9BV19 199 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 VRTNQ9H8Y1 702 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 RBM22Q9NW64 420 aaKnown RBP eCLIP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 GAS2O43903 313 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 PARNO95453 639 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 XIAPP98170 497 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 C4orf22Q6V702 233 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 TICAM1Q8IUC6 712 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 CHERPQ8IWX8 916 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 C12orf43Q96C57 262 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 THAP11Q96EK4 314 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 SNX27Q96L92 541 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 ERI2A8K979 691 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 ATE1O95260 518 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 SNX16P57768 344 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 CD300CQ08708 224 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 FOXD4Q12950 439 aaPredicted RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 BTBD8Q5XKL5 378 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 KLC3Q6P597 504 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 SMIM14Q96QK8 99 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 DUSP16Q9BY84 665 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 GBA3Q9H227 469 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 MRPL46Q9H2W6 279 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 EXD2Q9NVH0 621 aa17.17■□□□□ 0.34
PPP4R3A-208ENST00000555462 HTTP42858 3142 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 A8MT66 165 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 AGRPO00253 132 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 GRM5P41594 1212 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZFP1Q6P2D0 407 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPR152Q8TDT2 470 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 PCED1BQ96HM7 432 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 VPS50Q96JG6 964 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 IL22Q9GZX6 179 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 POLR1BQ9H9Y6 1135 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 WDR6Q9NNW5 1121 aaKnown RBP17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 CRTAC1Q9NQ79 661 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 CROTQ9UKG9 612 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 RLFQ13129 1914 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 CPB1P15086 417 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 GGT5P36269 586 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 TAF6P49848 677 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 PFKFB4Q16877 469 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 AAK1Q2M2I8 961 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms