RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 SERPINA4P29622 427 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 NR2C2P49116 596 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 LMNB2Q03252 620 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 KLF1Q13351 362 aaPredicted RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 AASDHQ4L235 1098 aaPredicted RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 NPNTQ6UXI9 565 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 ADAT2Q7Z6V5 191 aaKnown RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 CCDC13Q8IYE1 715 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 ZCCHC9Q8N567 271 aaKnown RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 PAF1Q8N7H5 531 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 CEP112Q8N8E3 955 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 RAB7BQ96AH8 199 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 VOPP1Q96AW1 172 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 ZNF641Q96N77 438 aaPredicted RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 LGMNQ99538 433 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 MGME1Q9BQP7 344 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 FRMD8P1Q9BZ68 369 aaPredicted RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 SUV39H2Q9H5I1 410 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 DKK3Q9UBP4 350 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.73■□□□□ 0.91
FOXN3-209ENST00000555353 CACNA1EQ15878 2313 aa20.73■□□□□ 0.91
FOXN3-209ENST00000555353 A0A1B0GTW7 788 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 BCAT2O15382 392 aaPredicted RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 CCNB1P14635 433 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 XPAP23025 273 aaPredicted RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PPP2CBP62714 309 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PPP2CAP67775 309 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 BCL2L1Q07817 233 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PPIDQ08752 370 aaKnown RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 NEK5Q6P3R8 708 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 SLC23A3Q6PIS1 610 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 TTC7BQ86TV6 843 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 CAMK1DQ8IU85 385 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PGBD5Q8N414 524 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 TEX26Q8N6G2 289 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 LRRN4Q8WUT4 740 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 MAML1Q92585 1016 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 NT5MQ9NPB1 228 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 SCUBE2Q9NQ36 999 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 TTLL3Q9Y4R7 772 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 A0A1W2PPC4 97 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PRR5-ARHGAP8B1AHC4 643 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 NEMP1O14524 444 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 SERPINF2P08697 491 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 MAT2AP31153 395 aaKnown RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 MAXP61244 160 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 ITKQ08881 620 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 AP1B1Q10567 949 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PRPF39Q86UA1 669 aaKnown RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 TRIM69Q86WT6 500 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 HCAR2Q8TDS4 363 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 OLFM3Q96PB7 478 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 NUDCD1Q96RS6 583 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 POLR1EQ9GZS1 481 aaKnown RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 BRD8Q9H0E9 1235 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 L2HGDHQ9H9P8 463 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 RRAGDQ9NQL2 400 aaPredicted RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 RBM22Q9NW64 420 aaKnown RBP eCLIP20.72■□□□□ 0.911e-6■■□□□ 11.4
FOXN3-209ENST00000555353 SMARCAL1Q9NZC9 954 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 SAE1Q9UBE0 346 aaPredicted RBP20.72■□□□□ 0.91
FOXN3-209ENST00000555353 SLC6A14Q9UN76 642 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 FADS3Q9Y5Q0 445 aa20.72■□□□□ 0.91
FOXN3-209ENST00000555353 PLXNA2O75051 1894 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.71■□□□□ 0.91
FOXN3-209ENST00000555353 CCDC188H7C350 402 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 LATO43561 262 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 AP1G1O43747 822 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 RNGTTO60942 597 aaKnown RBP20.71■□□□□ 0.91
FOXN3-209ENST00000555353 GJB3O75712 270 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 IRX4P78413 519 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 ADCY2Q08462 1091 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 RALGPS1Q5JS13 557 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 BRAT1Q6PJG6 821 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 HERPUD2Q9BSE4 406 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 AMACRQ9UHK6 382 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 ADAMTS9Q9P2N4 1935 aa20.71■□□□□ 0.91
FOXN3-209ENST00000555353 A0A1W2PQU0 124 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 TCRBV7S2A1N4TA0A589 114 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 TTC24A2A3L6 582 aaPredicted RBP20.7■□□□□ 0.9
FOXN3-209ENST00000555353 CTAGE15A4D2H0 777 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 KCNK1O00180 336 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 CTAGE8P0CG41 777 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 CR2P20023 1033 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 NUDT1P36639 197 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 AFF3P51826 1226 aaKnown RBP20.7■□□□□ 0.9
FOXN3-209ENST00000555353 SETMARQ53H47 684 aaPredicted RBP20.7■□□□□ 0.9
FOXN3-209ENST00000555353 CTAGE6Q86UF2 777 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 HORMAD1Q86X24 394 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 CTAGE4Q8IX94 777 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 C1orf216Q8TAB5 229 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 HAUS1Q96CS2 278 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 FEM1CQ96JP0 617 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 AP1M1Q9BXS5 423 aa20.7■□□□□ 0.9
FOXN3-209ENST00000555353 LNP1A1A4G5 178 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 C10orf142B7Z368 130 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 PDE2AO00408 941 aaPredicted RBP20.69■□□□□ 0.9
FOXN3-209ENST00000555353 TSPAN6O43657 245 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 PECAM1P16284 738 aaPredicted RBP20.69■□□□□ 0.9
FOXN3-209ENST00000555353 ABL2P42684 1182 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 SUOXP51687 545 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms