RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 WHRNQ9P202 907 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 RAB23Q9ULC3 237 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 FZD4Q9ULV1 537 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 NYNRINQ9P2P1 1898 aaKnown RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CACNA1IQ9P0X4 2223 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 MYO18AQ92614 2054 aaKnown RBP11.02□□□□□ -0.64
SHMT2-218ENST00000555213 A0A1W2PP55 124 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 CFAP69A5D8W1 941 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 C5orf60A6NFR6 353 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 RNF103O00237 685 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 NDUFS2O75306 463 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 JCHAINP01591 159 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 IGLV3-19P01714 112 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 UGT2B4P06133 528 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 CTSLP07711 333 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 XPAP23025 273 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 MCM3P25205 808 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 NFKBIAP25963 317 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 CD6P30203 668 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 P2RY2P41231 377 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 NEK3P51956 506 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 BCL2L1Q07817 233 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 WASHC5Q12768 1159 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 SIM2Q14190 667 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 PPP1R7Q15435 360 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 POM121L1PQ3SYA9 428 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 ARSIQ5FYB1 569 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 ITPRIPL1Q6GPH6 555 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 HIBCHQ6NVY1 386 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 FBXL19Q6PCT2 694 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 GDPD4Q6W3E5 623 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 FAM124AQ86V42 546 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 FBXO25Q8TCJ0 367 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 HTR3CQ8WXA8 447 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 RLN3Q8WXF3 142 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 CAVIN3Q969G5 261 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 PWWP2AQ96N64 755 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 ZNF641Q96N77 438 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 FUT8Q9BYC5 575 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 BTBD1Q9H0C5 482 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 SGK2Q9HBY8 427 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 PCDH9Q9HC56 1237 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 KLHL8Q9P2G9 620 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 EVLQ9UI08 416 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-218ENST00000555213 CACNA1HO95180 2353 aa11.02□□□□□ -0.65
SHMT2-218ENST00000555213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 IGHV1OR15-9A0A0B4J2B8 117 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 A0A1W2PQ67 120 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 TCRBV7S3A2A0A539 114 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 LRRC72A6NJI9 287 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 MAP2K7O14733 419 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 INSIG1O15503 277 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 KCNN4O15554 427 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 LILRB5O75023 590 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SOCS5O75159 536 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SASH3O75995 380 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 RHOBTB1O94844 696 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 METTL18O95568 372 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 GAS8O95995 478 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 HLA-DQB2P05538 268 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 PTPN3P26045 913 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 ADCY8P40145 1251 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 VPS41P49754 854 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 ITGA8P53708 1063 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 PLTPP55058 493 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 MAXP61244 160 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 RPL6Q02878 288 aaKnown RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 GPS1Q13098 491 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 ZBTB17Q13105 803 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 CBLBQ13191 982 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 P3H1Q32P28 736 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 RNASEH2BQ5TBB1 312 aaKnown RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 ALG1LQ6GMV1 187 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 BRAT1Q6PJG6 821 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 PRR23BQ6ZRT6 265 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 ERN2Q76MJ5 926 aaKnown RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 AADATQ8N5Z0 425 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 CCDC89Q8N998 374 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 CPT1BQ92523 772 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 RAB7BQ96AH8 199 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 TOE1Q96GM8 510 aaKnown RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SNF8Q96H20 258 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 AGAP3Q96P47 875 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 PPP1R2P1Q96PQ5 205 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 IL12RB2Q99665 862 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 HDAC8Q9BY41 377 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 PCED1AQ9H1Q7 454 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SEMA4AQ9H3S1 761 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms