RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NEUROG1Q92886 237 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 KTI12Q96EK9 354 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 NCAPGQ9BPX3 1015 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 MECRQ9BV79 373 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 SFXN1Q9H9B4 322 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 PLEKHA2Q9HB19 425 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 CD93Q9NPY3 652 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 SIRT3Q9NTG7 399 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 TBCAO75347 108 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 CER1O95813 267 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 ALDOAP04075 364 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 FGF3P11487 239 aaPredicted RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 PSMA3P25788 255 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 CTCFP49711 727 aaPredicted RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 ENTPD1P49961 510 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 BPIFB3P59826 476 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 ROR2Q01974 943 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 PTP4A2Q12974 167 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 PKN2Q16513 984 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 Q5PR19 223 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 DGAT2L7PQ6IED9 249 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 IL27RAQ6UWB1 636 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 APPL2Q8NEU8 664 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 ETNPPLQ8TBG4 499 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 MGARPQ8TDB4 240 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 ELP5Q8TE02 316 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 MCRS1Q96EZ8 462 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 RBM17Q96I25 401 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 EYA3Q99504 573 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 MUC13Q9H3R2 512 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 MAP6D1Q9H9H5 199 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 XAB2Q9HCS7 855 aaKnown RBP5.54□□□□□ -1.52
VRK1-203ENST00000555067 PCDHB16Q9NRJ7 776 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 HCFC1R1Q9NWW0 138 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 MYO6Q9UM54 1294 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 LYVE1Q9Y5Y7 322 aa5.54□□□□□ -1.52
VRK1-203ENST00000555067 CKAP5Q14008 2032 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 NPIPB15A6NHN6 443 aaPredicted RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 SAC3D1A6NKF1 404 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 PEX12O00623 359 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 NKX2-8O15522 239 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 SLC7A4O43246 635 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 TGFB1I1O43294 461 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 KAT7O95251 611 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 LCKP06239 509 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 SCG2P13521 617 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 IGFBP2P18065 325 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 HOXA11P31270 313 aaPredicted RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 ATP6V1E1P36543 226 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 EIF2DP41214 584 aaKnown RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 CDK7P50613 346 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 RASSF2P50749 326 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 PPP5CP53041 499 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 RARSP54136 660 aaKnown RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 PSMC6P62333 389 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 PRPF4BQ13523 1007 aaKnown RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 KEAP1Q14145 624 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 LRRC24Q50LG9 513 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 BMP2KLQ5H9B9 411 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 HMBOX1Q6NT76 420 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 TMEM88Q6PEY1 159 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 SYNE3Q6ZMZ3 975 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 HSCBQ8IWL3 235 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 ADGRF3Q8IZF5 1079 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 CNTROBQ8N137 903 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 OR8H3Q8N146 312 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 C7orf57Q8NEG2 295 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 Q8NFD4 153 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 OR8H1Q8NGG4 311 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 TBC1D31Q96DN5 1066 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 ISCUQ9H1K1 167 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 PDE7BQ9NP56 450 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 KRCC1Q9NPI7 259 aaPredicted RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 SEL1LQ9UBV2 794 aa5.53□□□□□ -1.52
VRK1-203ENST00000555067 CHORDC1Q9UHD1 332 aaPredicted RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 CORO1CQ9ULV4 474 aaPredicted RBP5.53□□□□□ -1.52
VRK1-203ENST00000555067 FLT1P17948 1338 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 KDM3AQ9Y4C1 1321 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 TSPAN4O14817 238 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 HOXC6P09630 235 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 NFKBIAP25963 317 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 TLE3Q04726 772 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 SF3A3Q12874 501 aaKnown RBP eCLIP5.52□□□□□ -1.53
VRK1-203ENST00000555067 AAK1Q2M2I8 961 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 WASHC2DQ5SRD0 308 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 DENND5BQ6ZUT9 1274 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 SCML4Q8N228 414 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 WDTC1Q8N5D0 677 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 ANKRD44Q8N8A2 993 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 NAT8LQ8N9F0 302 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 LSM14AQ8ND56 463 aaKnown RBP5.52□□□□□ -1.53
VRK1-203ENST00000555067 NUDCD2Q8WVJ2 157 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 NCSTNQ92542 709 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 KAT2AQ92830 837 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 PHF21BQ96EK2 531 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 HERC2P3Q9BVR0 1158 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 EDEM3Q9BZQ6 932 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 TAOK3Q9H2K8 898 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 RANBP17Q9H2T7 1088 aaKnown RBP5.52□□□□□ -1.53
VRK1-203ENST00000555067 NDST4Q9H3R1 872 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms