RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SLC20A2Q08357 652 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 CCDC15Q0P6D6 951 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 TBC1D25Q3MII6 688 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 LRRC73Q5JTD7 316 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF569Q5MCW4 686 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 ATXN7L2Q5T6C5 722 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 FAM181AQ8N9Y4 354 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 NETO2Q8NC67 525 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 CENPIQ92674 756 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 ISG20Q96AZ6 181 aaKnown RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 PCDHB18PQ96TA0 734 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 C11orf70Q9BRQ4 267 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 C1QTNF2Q9BXJ5 285 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 KLC2Q9H0B6 622 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 L2HGDHQ9H9P8 463 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 TMEM248Q9NWD8 314 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 DNAJC28Q9NX36 388 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 HECAQ9UBI9 543 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-215ENST00000554656 OR12D3Q9UGF7 316 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 HS3ST3A1Q9Y663 406 aa10.73□□□□□ -0.69
SHMT2-215ENST00000554656 C16orf96A6NNT2 1141 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 AREL1O15033 823 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 CSF2P04141 144 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 UGT2B4P06133 528 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 NME1P15531 152 aaKnown RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 RHOQP17081 205 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 IGFALSP35858 605 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 PTPN9P43378 593 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 MAPKAPK2P49137 400 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 HADHBP55084 474 aaKnown RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 PFN3P60673 137 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 E2F1Q01094 437 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 TLE3Q04726 772 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 EIF2B5Q13144 721 aaKnown RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF805Q5CZA5 627 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 RWDD4Q6NW29 188 aaKnown RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 SPACA3Q8IXA5 215 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 PLPP6Q8IY26 295 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 RBFAQ8N0V3 343 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 SLC35F6Q8N357 371 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 CTNNBL1Q8WYA6 563 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 FGF11Q92914 225 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 TRIM11Q96F44 468 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 LENG8Q96PV6 779 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 UBL7Q96S82 380 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 NAPGQ99747 312 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 TCEAL2Q9H3H9 227 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-215ENST00000554656 TMEM51Q9NW97 253 aa10.72□□□□□ -0.69
SHMT2-215ENST00000554656 A0A0U1RQJ8 604 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 CXorf51AA0A1B0GTR3 108 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 TCRBV5S1A1TA0A578 114 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 CTAGE9A4FU28 777 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 KRIT1O00522 736 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 CSO75390 466 aaKnown RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 TMCC1O94876 653 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 GSRP00390 522 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 MPOP05164 745 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 UNGP13051 313 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 ITIH2P19823 946 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 SDC4P31431 198 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 RFC1P35251 1148 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 RABIFP47224 123 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 GSCP56915 257 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 HNRNPKP61978 463 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 DEFB133Q30KQ1 61 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 GUSBP11Q6P575 273 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 PCSK4Q6UW60 755 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 PARGQ86W56 976 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 DCP2Q8IU60 420 aaKnown RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 RHOT2Q8IXI1 618 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 OR2AP1Q8NGE2 309 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 FAM174AQ8TBP5 190 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 IFI44Q8TCB0 444 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 FAM172AQ8WUF8 416 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 TBC1D31Q96DN5 1066 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 HIC2Q96JB3 615 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 VCPIP1Q96JH7 1222 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 FCRL3Q96P31 734 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-215ENST00000554656 WDR24Q96S15 920 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 MAGEH1Q9H213 219 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 SCN8AQ9UQD0 1980 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 JRKLQ9Y4A0 524 aa10.71□□□□□ -0.69
SHMT2-215ENST00000554656 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 FPGTO14772 594 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ATXN7O15265 892 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 INSIG1O15503 277 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 RRP8O43159 456 aaKnown RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 AQP9O43315 295 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 TSPAN6O43657 245 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 RAMP2O60895 175 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 GCATO75600 419 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms