RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	NCAN	O14594	1321 aa		4.94	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PTPRJ	Q12913	1337 aa		4.94	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LOC102723971	A0A1B0GUV8	181 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574		A0A1B0GVC2	190 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GRID2IP	A4D2P6	1211 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	INO80B-WBP1	J3KQ70	363 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	IRAK2	O43187	625 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	BUB1	O43683	1085 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PALM	O75781	387 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	VNN1	O95497	513 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	HLA-DRA	P01903	254 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CKB	P12277	381 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	EGR1	P18146	543 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TNFAIP3	P21580	790 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TBXAS1	P24557	533 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RGS2	P41220	211 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	VIPR2	P41587	438 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PIK3CA	P42336	1068 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GALC	P54803	685 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	HADHB	P55084	474 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	NAP1L1	P55209	391 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SREBF2	Q12772	1141 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PLA1A	Q53H76	456 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	NOMO2	Q5JPE7	1267 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TEX35	Q5T0J7	233 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MARCH8	Q5T0T0	291 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TMTC4	Q5T4D3	741 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ATF7IP2	Q5U623	682 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PLAG1	Q6DJT9	500 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TANGO2	Q6ICL3	276 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MTHFD1L	Q6UB35	978 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LRRC57	Q8N9N7	239 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZFP28	Q8NHY6	868 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	U2AF1L4	Q8WU68	220 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RFFL	Q8WZ73	363 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	OSBPL9	Q96SU4	736 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TCHP	Q9BT92	498 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FAM167B	Q9BTA0	163 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CNPPD1	Q9BV87	410 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	KATNAL1	Q9BW62	490 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	INO80B	Q9C086	356 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SIK2	Q9H0K1	926 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PCDHAC1	Q9H158	963 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ISCU	Q9H1K1	167 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MINDY3	Q9H8M7	445 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RNF14	Q9UBS8	474 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CPSF3	Q9UKF6	684 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SMG5	Q9UPR3	1016 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TNFSF13B	Q9Y275	285 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574		Q9Y3F1	56 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FRMPD3	Q5JV73	1810 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CES2	O00748	559 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	DCLK1	O15075	740 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	B4GALT5	O43286	388 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CDC14B	O60729	498 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SRGAP2	O75044	1071 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RTN2	O75298	545 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SGPL1	O95470	568 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ASS1	P00966	412 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TFRC	P02786	760 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TUBB	P07437	444 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	IQCF3	P0C7M6	154 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CYP11B1	P15538	503 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CHRNB2	P17787	502 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	BDNF	P23560	247 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	USP8	P40818	1118 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TNFSF9	P41273	254 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CPT1A	P50416	773 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PDE6C	P51160	858 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	AFF3	P51826	1226 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	WNT3	P56703	355 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GEMIN4	P57678	1058 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	NOP14	P78316	857 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CDR2	Q01850	454 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ARHGEF7	Q14155	803 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	KYAT1	Q16773	422 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MED25	Q71SY5	747 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	KCTD20	Q7Z5Y7	419 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLFN11	Q7Z7L1	901 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TLK2	Q86UE8	772 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF410	Q86VK4	478 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLC47A2	Q86VL8	602 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF677	Q86XU0	584 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PALB2	Q86YC2	1186 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CCDC28A	Q8IWP9	274 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RHOT2	Q8IXI1	618 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SYCE1	Q8N0S2	351 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MSANTD4	Q8NCY6	345 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	OR5B17	Q8NGF7	314 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	OR1N1	Q8NGS0	311 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLC20A1	Q8WUM9	679 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	UBE2Q2	Q8WVN8	375 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZBTB10	Q96DT7	871 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TMEM176A	Q96HP8	235 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLC46A1	Q96NT5	459 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MMS19	Q96T76	1030 aa		4.93	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PRPF18	Q99633	342 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms