RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PFN3P60673 137 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 HNRNPKP61978 463 aaKnown RBP eCLIP8.81□□□□□ -1
ACTN1-213ENST00000554508 YPEL5P62699 121 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 POLR2LP62875 67 aaKnown RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 BCL2L1Q07817 233 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 TBX2Q13207 712 aaPredicted RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 PTK2BQ14289 1009 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 GSE1Q14687 1217 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 SMAD1Q15797 465 aaKnown RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 SLC18A3Q16572 532 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 UGP2Q16851 508 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 SMTNL2Q2TAL5 461 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 CFAP58Q5T655 872 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 ERAP2Q6P179 960 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 TMPRSS12Q86WS5 348 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 LRRC49Q8IUZ0 686 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 SLC22A18ASQ8N1D0 253 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 BBS5Q8N3I7 341 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 SLC25A45Q8N413 288 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 NPWQ8N729 165 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 NETO2Q8NC67 525 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 OR4C6Q8NH72 309 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 ZNF564Q8TBZ8 553 aaPredicted RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 FAM71BQ8TC56 605 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 NSMCE1Q8WV22 266 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 CTNNBL1Q8WYA6 563 aaPredicted RBP8.81□□□□□ -1
ACTN1-213ENST00000554508 TSC1Q92574 1164 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 CENPTQ96BT3 561 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 BTBD6Q96KE9 485 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 EXOC2Q96KP1 924 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 CSPG4P5Q96PW8 444 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 PSKH2Q96QS6 385 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 DNAJC7Q99615 494 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.81□□□□□ -1
ACTN1-213ENST00000554508 UVRAGQ9P2Y5 699 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 SEPT3Q9UH03 358 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 GGT7Q9UJ14 662 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 NENFQ9UMX5 172 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 ITM2BQ9Y287 266 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 ASXL3Q9C0F0 2248 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 AKAP13Q12802 2813 aa8.81□□□□□ -1
ACTN1-213ENST00000554508 IGF2RP11717 2491 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 A0A1W2PQ67 120 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 TMEM110-MUSTN1A8MSY1 372 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 SCAMP1O15126 338 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 SIGLEC6O43699 453 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 BUB1BO60566 1050 aaPredicted RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 SDC3O75056 442 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PROSCO94903 275 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PIGNO95427 931 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CSF2P04141 144 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 TCF4P15884 667 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ACP1P24666 158 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ACADVLP49748 655 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 THOP1P52888 689 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CDH6P55285 790 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 AP1S1P61966 158 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 E2F1Q01094 437 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 SLC25A11Q02978 314 aaKnown RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 PDE1CQ14123 709 aaPredicted RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 FZD2Q14332 565 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 KRT81Q14533 505 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 AGERQ15109 404 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PDK2Q15119 407 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ASTE1Q2TB18 679 aaPredicted RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 CCDC157Q569K6 752 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 RALGPS1Q5JS13 557 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 TXNRD3NBQ6F5E7 133 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 DHRS13Q6UX07 377 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ARHGAP36Q6ZRI8 547 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PARGQ86W56 976 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CAMK1DQ8IU85 385 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 BTN2A2Q8WVV5 523 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ZCCHC14Q8WYQ9 949 aaKnown RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 ANP32BQ92688 251 aaKnown RBP8.8□□□□□ -1
ACTN1-213ENST00000554508 ECHDC3Q96DC8 303 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 DEF6Q9H4E7 631 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PCDH18Q9HCL0 1135 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 PCDH12Q9NPG4 1184 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ETNK2Q9NVF9 386 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 EVA1BQ9NVM1 165 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 DNAJC28Q9NX36 388 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 NLGN3Q9NZ94 848 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CTTNBP2NLQ9P2B4 639 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 CSNK1G3Q9Y6M4 447 aa8.8□□□□□ -1
ACTN1-213ENST00000554508 URB1O60287 2271 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 RP1P56715 2156 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 TRIM38O00635 465 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 AKR1B10O60218 316 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 MAFKO60675 156 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 SOCS5O75159 536 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms