RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MAMLD1Q13495 774 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 LRRC14Q15048 493 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 UGP2Q16851 508 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ERAP2Q6P179 960 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 GUSBP11Q6P575 273 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 EFL1Q7Z2Z2 1120 aaKnown RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 RBFAQ8N0V3 343 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 TP53I13Q8NBR0 393 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ZNF248Q8NDW4 579 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ZNF641Q96N77 438 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 BBC3Q96PG8 261 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 TUBGCP5Q96RT8 1024 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 LGMNQ99538 433 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 HSD3B7Q9H2F3 369 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 PRORYQ9H606 182 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 LRRC19Q9H756 370 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 POLR1BQ9H9Y6 1135 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 TDRD6O60522 2096 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 TMCO5BA8MYB1 307 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 LMO7DNF2Z398 122 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 J3KR12 359 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 EEF2KO00418 725 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 PRAMEF11O60813 436 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 GCATO75600 419 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 RNF8O76064 485 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 DXOO77932 396 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 PIGNO95427 931 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 ATP1A3P13637 1013 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 PCBP4P57723 403 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 C1orf61Q13536 156 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 ISXQ2M1V0 245 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 ERMARDQ5T6L9 678 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 PLEKHA7Q6IQ23 1121 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 BRAT1Q6PJG6 821 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 SCG3Q8WXD2 468 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 NAT6Q93015 286 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 FCRL3Q96P31 734 aaPredicted RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 LRRC61Q9BV99 259 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 BOCQ9BWV1 1114 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 TCEAL2Q9H3H9 227 aaPredicted RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 DHX35Q9H5Z1 703 aaKnown RBP18.94■□□□□ 0.62
CPSF2-203ENST00000554290 PDFQ9HBH1 243 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 GPATCH2LQ9NWQ4 482 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 TAS2R14Q9NYV8 317 aa18.94■□□□□ 0.62
CPSF2-203ENST00000554290 TSPAN11A1L157 253 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 MUSKO15146 869 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 LZTS3O60299 673 aaPredicted RBP18.93■□□□□ 0.62
CPSF2-203ENST00000554290 TGM2P21980 687 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 HTR1BP28222 390 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 CSNK1DP48730 415 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 PAPOLAP51003 745 aaKnown RBP18.93■□□□□ 0.62
CPSF2-203ENST00000554290 ERVPABLB-1P60509 514 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 TYRO3Q06418 890 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 IRF4Q15306 451 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 ELOCQ15369 112 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 C6orf132Q5T0Z8 1188 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 ESRP1Q6NXG1 681 aaKnown RBP18.93■□□□□ 0.62
CPSF2-203ENST00000554290 FSTL5Q8N475 847 aaPredicted RBP18.93■□□□□ 0.62
CPSF2-203ENST00000554290 WDR48Q8TAF3 677 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 CELF6Q96J87 481 aaKnown RBP18.93■□□□□ 0.62
CPSF2-203ENST00000554290 SYT11Q9BT88 431 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 ATP13A3Q9H7F0 1226 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 PCDH12Q9NPG4 1184 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 DOLKQ9UPQ8 538 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 RAI2Q9Y5P3 530 aa18.93■□□□□ 0.62
CPSF2-203ENST00000554290 YY2O15391 372 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 TEX33O43247 280 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 PALMO75781 387 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 ALPIP09923 528 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 CTSEP14091 401 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 TSHRP16473 764 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SERPINA4P29622 427 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 LIG3P49916 1009 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 TLE3Q04726 772 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 WSCD2Q2TBF2 565 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SRLQ86TD4 932 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 CAMK1DQ8IU85 385 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SPACA3Q8IXA5 215 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SLC35F3Q8IY50 421 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SDR16C5Q8N3Y7 309 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 ATL2Q8NHH9 583 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 SLC39A8Q9C0K1 460 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 RTN4Q9NQC3 1192 aaKnown RBP18.92■□□□□ 0.62
CPSF2-203ENST00000554290 THSD1Q9NS62 852 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 PCSK1NQ9UHG2 260 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 PNMA8BQ9ULN7 279 aaPredicted RBP18.92■□□□□ 0.62
CPSF2-203ENST00000554290 PADI4Q9UM07 663 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 COQ6Q9Y2Z9 468 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 LAMA5O15230 3695 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 BAHCC1Q9P281 2608 aa18.92■□□□□ 0.62
CPSF2-203ENST00000554290 TMEM191CA6NGB0 347 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 PRPSAP2O60256 369 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 BUB1BO60566 1050 aaPredicted RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 TCEA3O75764 348 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 RASGRP1O95267 797 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 C6P13671 934 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms