RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MYOFQ9NZM1 2061 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 C5orf42Q9H799 3197 aa7.71□□□□□ -1.17
TDP1-209ENST00000554180 TSPAN11A1L157 253 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 TTC24A2A3L6 582 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 TTC34A8MYJ7 566 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SPECC1L-ADORA2AF8WAN1 911 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 GJB3O75712 270 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SASH3O75995 380 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 USP1O94782 785 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ALDH1A2O94788 518 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 PGLSO95336 258 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 PRLP01236 227 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SRFP11831 508 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 DRD1P21728 446 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ADRA1DP25100 572 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 NFKBIAP25963 317 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 CCNHP51946 323 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 GPX6P59796 221 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 PDE1BQ01064 536 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 IFFO1Q0D2I5 559 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 GPS2Q13227 327 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 MSLNQ13421 630 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 TDGQ13569 410 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ENPP2Q13822 863 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ELAVL3Q14576 367 aaKnown RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 ZNF234Q14588 700 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 CRYMQ14894 314 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 RASA2Q15283 850 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 KLHL38Q2WGJ6 581 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 FNDC3BQ53EP0 1204 aaKnown RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 TMEM196Q5HYL7 178 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SIRPB2Q5JXA9 342 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SPANXN3Q5MJ09 141 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ARMC12Q5T9G4 340 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 BRAT1Q6PJG6 821 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 UNC5AQ6ZN44 842 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 DPY19L3Q6ZPD9 716 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 C3orf62Q6ZUJ4 267 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 Q6ZVU0 165 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 MTERF4Q7Z6M4 381 aaKnown RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 IGDCC3Q8IVU1 814 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 NDUFAF2Q8N183 169 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 MPP5Q8N3R9 675 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 RIBC1Q8N443 379 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 MAFAQ8NHW3 353 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 TTC8Q8TAM2 541 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 BRSK1Q8TDC3 778 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 HCAR2Q8TDS4 363 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 SORCS1Q8WY21 1168 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 RMDN1Q96DB5 314 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ECHDC3Q96DC8 303 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 NSMCE3Q96MG7 304 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ZIM3Q96PE6 472 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 CYTH2Q99418 400 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 HEPHQ9BQS7 1158 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ROPN1BQ9BZX4 212 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 TNKS2Q9H2K2 1166 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 TMEM245Q9H330 911 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 TRABDQ9H4I3 376 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ACSS3Q9H6R3 686 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 ROPN1Q9HAT0 212 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 PIH1D1Q9NWS0 290 aaKnown RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 HACD3Q9P035 362 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 DKK3Q9UBP4 350 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 EVLQ9UI08 416 aaPredicted RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 TCAF1Q9Y4C2 921 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 PCDHGC4Q9Y5F7 938 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 NFS1Q9Y697 457 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.71□□□□□ -1.18
TDP1-209ENST00000554180 PIAS3Q9Y6X2 628 aa7.71□□□□□ -1.18
TDP1-209ENST00000554180 COL4A2P08572 1712 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 MUC22E2RYF6 1773 aaPredicted RBP7.7□□□□□ -1.18
TDP1-209ENST00000554180 EXOC1LA0A1B0GW35 172 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 TCRBV9S1A1TA0A576 114 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 MROH6A6NGR9 719 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 GOLGA6L10A6NI86 522 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 ANKRD66B4E2M5 251 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 OPA1O60313 960 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 PIGNO95427 931 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 CRTAMO95727 393 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 PRNPP04156 253 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 ASGR2P07307 311 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 IL9P15248 144 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 PAMP19021 973 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 PRKCHP24723 683 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 PSMA3P25788 255 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 SSTR1P30872 391 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 KIR2DL1P43626 348 aaPredicted RBP7.7□□□□□ -1.18
TDP1-209ENST00000554180 CHRNA4P43681 627 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 SOX9P48436 509 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 GALK1P51570 392 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 EPHB1P54762 984 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 POLR2LP62875 67 aaKnown RBP7.7□□□□□ -1.18
TDP1-209ENST00000554180 CRADDP78560 199 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 ZNF844Q08AG5 666 aa7.7□□□□□ -1.18
TDP1-209ENST00000554180 GRSF1Q12849 480 aaKnown RBP eCLIP7.7□□□□□ -1.18
TDP1-209ENST00000554180 MTM1Q13496 603 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms