RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 DRGXA6NNA5 263 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 LGALS16A8MUM7 142 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 I6L893 689 aaPredicted RBP8.97□□□□□ -0.97
TDP1-208ENST00000553989 KRIT1O00522 736 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 MUSKO15146 869 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 RAD51BO15315 384 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 TSPAN6O43657 245 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 CTAGE8P0CG41 777 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 GIMD1P0DJR0 217 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 TGM2P21980 687 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 FLT3P36888 993 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ETFBP38117 255 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 GCGRP47871 477 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 RPIAP49247 311 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ERVPABLB-1P60509 514 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ARF5P84085 180 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ZBED6P86452 979 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ATP11AP98196 1134 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 SLC20A2Q08357 652 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 PTK2BQ14289 1009 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 FGL2Q14314 439 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 NR0B2Q15466 257 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 MAN2A1Q16706 1144 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 CDO1Q16878 200 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ISXQ2M1V0 245 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ARL13BQ3SXY8 428 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 C2CD6Q53TS8 623 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 HSP90AA4PQ58FG1 418 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 GUSBP11Q6P575 273 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 RBM44Q6ZP01 1051 aaKnown RBP8.97□□□□□ -0.97
TDP1-208ENST00000553989 CTAGE6Q86UF2 777 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 XYLT1Q86Y38 959 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 CTAGE4Q8IX94 777 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ZNF683Q8IZ20 524 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 BTN2A2Q8WVV5 523 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 GLMNQ92990 594 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ARHGEF26Q96DR7 871 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 PGAP3Q96FM1 320 aaPredicted RBP8.97□□□□□ -0.97
TDP1-208ENST00000553989 ATXN7L3BQ96GX2 97 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 HIC2Q96JB3 615 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 BMFQ96LC9 184 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 C1orf74Q96LT6 269 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 HAPLN3Q96S86 360 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 DNAJC7Q99615 494 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.97□□□□□ -0.97
TDP1-208ENST00000553989 TMEM51Q9NW97 253 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 HECAQ9UBI9 543 aaPredicted RBP8.97□□□□□ -0.97
TDP1-208ENST00000553989 SPASTQ9UBP0 616 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 APOBEC3BQ9UH17 382 aaKnown RBP8.97□□□□□ -0.97
TDP1-208ENST00000553989 HPCAL4Q9UM19 191 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ITM2BQ9Y287 266 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 IGLV3-10A0A075B6K4 115 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 LY6G6EA0A0G2JKS1 128 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 C16orf96A6NNT2 1141 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 AP1G1O43747 822 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 KRT86O43790 486 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 ZNF821O75541 412 aaPredicted RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 DXOO77932 396 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 NDUFA10O95299 355 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 GYPCP04921 128 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 UGT2B4P06133 528 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 ANXA6P08133 673 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 CYP11B1P15538 503 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 GKP32189 559 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 SCNN1AP37088 669 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 ABL2P42684 1182 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 GEMIN4P57678 1058 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 SNRPD1P62314 119 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 CKAP4Q07065 602 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 VAC14Q08AM6 782 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 C1orf61Q13536 156 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 SPIDRQ14159 915 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 DRAP1Q14919 205 aaPredicted RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 ZNF805Q5CZA5 627 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 PRRT3Q5FWE3 981 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 LRRC73Q5JTD7 316 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 FAXCQ5TGI0 409 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 LEKR1Q6ZMV7 388 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 VPS36Q86VN1 386 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 FAM71AQ8IYT1 594 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 RBFAQ8N0V3 343 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 ARL14Q8N4G2 192 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 DENND6BQ8NEG7 585 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 CXorf40AQ8TE69 158 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 RAB7BQ96AH8 199 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 C1QTNF7Q9BXJ2 289 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 DPH1Q9BZG8 443 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 SLC13A1Q9BZW2 595 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 TSGA10Q9BZW7 698 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 SIX2Q9NPC8 291 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 LZTFL1Q9NQ48 299 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 METTL5Q9NRN9 209 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 PSD3Q9NYI0 1048 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 GGT7Q9UJ14 662 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms