RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ANGPT1Q15389 498 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 PPP1R7Q15435 360 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 PIP5KL1Q5T9C9 394 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 AGBL4Q5VU57 503 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 FBXL19Q6PCT2 694 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-209ENST00000553949 SYDE1Q6ZW31 735 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-209ENST00000553949 KBTBD6Q86V97 674 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 LONP2Q86WA8 852 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 PAF1Q8N7H5 531 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 IPMKQ8NFU5 416 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 FAM131CQ96AQ9 280 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 MRGPRX2Q96LB1 330 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 ETNK1Q9HBU6 452 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 RAB6BQ9NRW1 208 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 FZD4Q9ULV1 537 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 NCKAP1Q9Y2A7 1128 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-209ENST00000553949 PCDHB9Q9Y5E1 797 aa12.34□□□□□ -0.43
SHMT2-209ENST00000553949 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 TTI1O43156 1089 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 SLC7A4O43246 635 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CPP00450 1065 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PRLP01236 227 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PDHA1P08559 390 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 SP9P0CG40 484 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CTAGE8P0CG41 777 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 ADRB3P13945 408 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 OXTRP30559 389 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 RPL26P61254 145 aaKnown RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 POLR2LP62875 67 aaKnown RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CDK18Q07002 472 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 GPS1Q13098 491 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 SEMA5AQ13591 1074 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PTK6Q13882 451 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 UGP2Q16851 508 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 ZNF528Q3MIS6 628 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 KDELC2Q7Z4H8 507 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 FAM124AQ86V42 546 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 WDR5BQ86VZ2 330 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CTAGE4Q8IX94 777 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PDCD7Q8N8D1 485 aaKnown RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CCHCR1Q8TD31 782 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 RLN3Q8WXF3 142 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 NELL1Q92832 810 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 IFT43Q96FT9 208 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 FEM1CQ96JP0 617 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 TRIB3Q96RU7 358 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 ADGRE3Q9BY15 652 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 FAM126AQ9BYI3 521 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 PHTF1Q9UMS5 762 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
SHMT2-209ENST00000553949 RPL26L1Q9UNX3 145 aaKnown RBP12.33□□□□□ -0.44
SHMT2-209ENST00000553949 LOC285095A0A1B0GVY8 99 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 UPK3BL1B0FP48 263 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 UPK3BL2E5RIL1 263 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 E7EVH7 732 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 PSMD3O43242 534 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 RAD51CO43502 376 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 AP2A1O95782 977 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 NDST3O95803 873 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 EPOP01588 193 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-209ENST00000553949 CD6P30203 668 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 ADRA1AP35348 466 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 ABL2P42684 1182 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 TNNT3P45378 269 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-209ENST00000553949 LMAN1P49257 510 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 SUOXP51687 545 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 ADPRHP54922 357 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 BASP1P80723 227 aaKnown RBP12.32□□□□□ -0.44
SHMT2-209ENST00000553949 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
SHMT2-209ENST00000553949 GALNT3Q14435 633 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 SPARCL1Q14515 664 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 LRRC73Q5JTD7 316 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 SYCP2LQ5T4T6 812 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 KCTD11Q693B1 232 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 MAATS1Q7Z4T9 603 aa12.32□□□□□ -0.44
SHMT2-209ENST00000553949 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-209ENST00000553949 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms