RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 RAB26Q9ULW5 256 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 A0A1W2PQ67 120 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 CAPN14A8MX76 684 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 PSMD12O00232 456 aaPredicted RBP9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 TPP1O14773 563 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 KLF11O14901 512 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 SEPT4O43236 478 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 SIN3BO75182 1162 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 GMNNO75496 209 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 BAIAP3O94812 1187 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ODC1P11926 461 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 MZF1P28698 734 aaPredicted RBP9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 SERPINB9P50453 376 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 COPAP53621 1224 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 AIF1P55008 147 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 TEX44Q53QW1 395 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 PPM1JQ5JR12 505 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 MFSD14CQ5VZR4 134 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 TIFABQ6ZNK6 161 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ARHGAP36Q6ZRI8 547 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 GPR141Q7Z602 305 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ZSCAN18Q8TBC5 510 aaPredicted RBP9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ACTRT2Q8TDY3 377 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 E2F7Q96AV8 911 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 ACBD6Q9BR61 282 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 SIAEQ9HAT2 523 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 EBF1Q9UH73 591 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 POMPQ9Y244 141 aa9.12□□□□□ -0.95
AL049839.2-201ENST00000553947 E2F8A0AVK6 867 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 OR4Q2P0C623 313 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NFKB1P19838 968 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 HCAR3P49019 387 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ATXN3P54252 364 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 SF3B4Q15427 424 aaKnown RBP eCLIP9.11□□□□□ -0.955e-12■□□□□ 10
AL049839.2-201ENST00000553947 NANOGP8Q6NSW7 305 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NUDCD3Q8IVD9 361 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 PDZD8Q8NEN9 1154 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 TAMM41Q96BW9 452 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 UBP1Q9NZI7 540 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 FBXO9Q9UK97 447 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NUDT5Q9UKK9 219 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 SHROOM3Q8TF72 1996 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 AP2A1O95782 977 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CHEK2O96017 543 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 PRKCGP05129 697 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 BPGMP07738 259 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ELNP15502 786 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ZNF23P17027 643 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 TPH1P17752 444 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ABCG1P45844 678 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 GALNT2Q10471 571 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 KCTD11Q693B1 232 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CCSAPQ6IQ19 270 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ATG14Q6ZNE5 492 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CRLF3Q8IUI8 442 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 PPP1R14CQ8TAE6 165 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 DPF3Q92784 378 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ZNF512Q96ME7 567 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 AGAP2Q99490 1192 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 SIK2Q9H0K1 926 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 COPS7BQ9H9Q2 264 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 SPC25Q9HBM1 224 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 MRGBPQ9NV56 204 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CDH22Q9UJ99 828 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NEU3Q9UQ49 428 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 COL4A4P53420 1690 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 A8MU76 341 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CFAP99D6REC4 459 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 M0QZQ0 153 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 MSI1O43347 362 aaKnown RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 IL1BP01584 269 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CYP11A1P05108 521 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NR4A1P22736 598 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 TRPC1P48995 793 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NSUN2Q08J23 767 aaKnown RBP eCLIP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 APOFQ13790 326 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 NRF1Q16656 503 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 OGFRL1Q5TC84 451 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 OVOS1Q6IE37 1185 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CPNE9Q8IYJ1 553 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 LZTR1Q8N653 840 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 RNF34Q969K3 372 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 C12orf43Q96C57 262 aaKnown RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 HDAC11Q96DB2 347 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 MFSD3Q96ES6 412 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 CERS2Q96G23 380 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ATXN7L3BQ96GX2 97 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 MAN1C1Q9NR34 630 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ZNF358Q9NW07 568 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 DAPK2Q9UIK4 370 aa9.11□□□□□ -0.95
AL049839.2-201ENST00000553947 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms