RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 RAD51BO15315 384 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 MFSD11O43934 449 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 MMP20O60882 483 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 TM7SF2O76062 418 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 ITGAVP06756 1048 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 CYLC1P35663 651 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 GARSP41250 739 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 NOP2P46087 812 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 POLR2LP62875 67 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 GALNT2Q10471 571 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 LRRC38Q5VT99 294 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 ERAP2Q6P179 960 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 GCNT7Q6ZNI0 430 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 Q6ZSR6 202 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 GLRX5Q86SX6 157 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 GATAD2AQ86YP4 633 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 PQLC3Q8N755 202 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 OR13H1Q8NG92 308 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 CXorf40AQ8TE69 158 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 SAP25Q8TEE9 199 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 ECHDC3Q96DC8 303 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 RNF157Q96PX1 679 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 CDC6Q99741 560 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 WRAP53Q9BUR4 548 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 PCDH12Q9NPG4 1184 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 LUC7LQ9NQ29 371 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 ANGPTL2Q9UKU9 493 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 PCDHA13Q9Y5I0 950 aa10.3□□□□□ -0.76
HNRNPC-208ENST00000553753 SHROOM3Q8TF72 1996 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ZNF487B1APH4 448 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TRAFD1O14545 582 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 FPGTO14772 594 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 CR2P20023 1033 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 COMTP21964 271 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 EPHA8P29322 1005 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MMP13P45452 471 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 HADHBP55084 474 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SHC2P98077 582 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 FOXC1Q12948 553 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 BNIP3Q12983 259 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 IFI16Q16666 785 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 INAVAQ3KP66 663 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TIGD7Q6NT04 549 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ZSWIM9Q86XI8 627 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 VSIG1Q86XK7 387 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 DCP2Q8IU60 420 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TMTC1Q8IUR5 882 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 RHOT1Q8IXI2 618 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SLC22A18ASQ8N1D0 253 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 PGBD5Q8N414 524 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 PAF1Q8N7H5 531 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 DENND6BQ8NEG7 585 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 BAHD1Q8TBE0 780 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 NUDCD1Q96RS6 583 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MGME1Q9BQP7 344 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 C1QTNF7Q9BXJ2 289 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 EPN1Q9Y6I3 576 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 FREM2Q5SZK8 3169 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TTC24A2A3L6 582 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SOWAHDA6NJG2 315 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 C3orf70A6NLC5 250 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MATN3O15232 486 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SPOPO43791 374 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 NDUFA10O95299 355 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TRIM16O95361 564 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MX2P20592 715 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 FECHP22830 423 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 CCNCP24863 283 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 RABIFP47224 123 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MAXP61244 160 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 GBE1Q04446 702 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 RALGPS1Q5JS13 557 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 KYAT3Q6YP21 454 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 PTAR1Q7Z6K3 402 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TEX26Q8N6G2 289 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SPOCK2Q92563 424 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TSGA13Q96PP4 275 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 MAK16Q9BXY0 300 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 DDX56Q9NY93 547 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 DTLQ9NZJ0 730 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 TFR2Q9UP52 801 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 WASF3Q9UPY6 502 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ATP8A1Q9Y2Q0 1164 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 HYOU1Q9Y4L1 999 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 PCDHGC4Q9Y5F7 938 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ALG6Q9Y672 507 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 ANKRD36A6QL64 1941 aa10.29□□□□□ -0.76
HNRNPC-208ENST00000553753 A0A0A6YYK5 440 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 SPTY2D1-AS1A0A0U1RR47 76 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms