RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SLC35B2Q8TB61 432 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 BAHD1Q8TBE0 780 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 EXOC4Q96A65 974 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF707Q96C28 371 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 NECTIN4Q96NY8 510 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 TSGA13Q96PP4 275 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PPP1R2P1Q96PQ5 205 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 RHOXF2Q9BQY4 288 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ERP44Q9BS26 406 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 FOXP3Q9BZS1 431 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 DDX47Q9H0S4 455 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SLC6A17Q9H1V8 727 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 MAGEH1Q9H213 219 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PRDM12Q9H4Q4 367 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ZFP14Q9HCL3 533 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 EPB41L5Q9HCM4 733 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ARHGEF4Q9NR80 690 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 KLHL11Q9NVR0 708 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 HCFC1R1Q9NWW0 138 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GOLGA6AQ9NYA3 693 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PAK5Q9P286 719 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 AMACRQ9UHK6 382 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GGT7Q9UJ14 662 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 AGO1Q9UL18 857 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 DNPEPQ9ULA0 475 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 VANGL2Q9ULK5 521 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 MTCH2Q9Y6C9 303 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 DOCK4Q8N1I0 1966 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 OBSL1O75147 1896 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 DOCK6Q96HP0 2047 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 UQCRHLA0A096LP55 91 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CXorf51AA0A1B0GTR3 108 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 A0A1B0GVM2 712 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TCRBV7S2A1N4TA0A589 114 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ILVBLA1L0T0 632 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 C5orf60A6NFR6 353 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ZSCAN5CA6NGD5 496 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 EPOPA6NHQ4 379 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CHURC1-FNTBB4DL54 471 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM72CH0Y354 149 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 AP3B1O00203 1094 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 DYNC1I1O14576 645 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TTI1O43156 1089 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 RAD51CO43502 376 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 RAMP2O60895 175 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TBL1XO60907 577 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 GCATO75600 419 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 HEXIM1O94992 359 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 IFNB1P01574 187 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 UQCRHP07919 91 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ZGLP1P0C6A0 271 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 GJA1P17302 382 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FDFT1P37268 417 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ADCY8P40145 1251 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CCR2P41597 374 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 KCNJ1P48048 391 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 IFNAR2P48551 515 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 RENBPP51606 427 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 GEMIN4P57678 1058 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 GUCY2DQ02846 1103 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SLC20A2Q08357 652 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 AP1B1Q10567 949 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PTK6Q13882 451 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PRPSAP1Q14558 356 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 POLD3Q15054 466 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PARP15Q460N3 678 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SLC45A4Q5BKX6 768 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM72AQ5TYM5 149 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PIK3R6Q5UE93 754 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 MANEALQ5VSG8 457 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 NCBP2-AS2Q69YL0 99 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ITPRIPL1Q6GPH6 555 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM72DQ6L9T8 149 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 WDR93Q6P2C0 686 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PPP1R21Q6ZMI0 780 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CCNI2Q6ZMN8 369 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TTLL10Q6ZVT0 673 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 MTSS1LQ765P7 747 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PID1Q7Z2X4 250 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 C14orf80Q86SX3 495 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM72BQ86X60 149 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF354CQ86Y25 554 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 JAMLQ86YT9 394 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM217AQ8IXS0 508 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 YAF2Q8IY57 180 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC13Q8IYE1 715 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ADGRG2Q8IZP9 1017 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ALLCQ8N6M5 410 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 C12orf76Q8N812 135 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ANKS4BQ8N8V4 417 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TDRD5Q8NAT2 981 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 BPIFB1Q8TDL5 484 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SH3RF2Q8TEC5 729 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 DDI1Q8WTU0 396 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 HTR3CQ8WXA8 447 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SMARCD2Q92925 531 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 HDAC11Q96DB2 347 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms