RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 NR2C2P49116 596 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 AFF3P51826 1226 aaKnown RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 SETMARQ53H47 684 aaPredicted RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 FAM182AQ5T1J6 154 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 NEK5Q6P3R8 708 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 BRAT1Q6PJG6 821 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 BBS12Q6ZW61 710 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 ADAT2Q7Z6V5 191 aaKnown RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 ZSWIM9Q86XI8 627 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 PDCD6IPQ8WUM4 868 aaKnown RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 P3H4Q92791 437 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 MYOCQ99972 504 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 SEMA3CQ99985 751 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 GTPBP2Q9BX10 602 aaKnown RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 CEP41Q9BYV8 373 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 OSBPL8Q9BZF1 889 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 POLR1EQ9GZS1 481 aaKnown RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 HAUS2Q9NVX0 235 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 PCDHGC4Q9Y5F7 938 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 ZNF292O60281 2723 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 DDX3YO15523 660 aaKnown RBP23.02■■□□□ 1.28
TDP1-206ENST00000553569 PRKCGP05129 697 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 PYGMP11217 842 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 CSNK1EP49674 416 aaKnown RBP23.02■■□□□ 1.28
TDP1-206ENST00000553569 DSC2Q02487 901 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 ZBTB17Q13105 803 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 TEAD4Q15561 434 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 ZNF284Q2VY69 593 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 KIAA1161Q6NSJ0 714 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 BZW1Q7L1Q6 419 aaKnown RBP23.02■■□□□ 1.28
TDP1-206ENST00000553569 FZD3Q9NPG1 666 aa23.02■■□□□ 1.28
TDP1-206ENST00000553569 TP53BP1Q12888 1972 aaPredicted RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 A0A1B0GVT2 93 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 WNT9AO14904 365 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 AREL1O15033 823 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 SLC31A1O15431 190 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 TSPAN6O43657 245 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 PTPN7P35236 360 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 ATXN3P54252 364 aaPredicted RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 RPS21P63220 83 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 RACK1P63244 317 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 IFI35P80217 286 aaPredicted RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 ARHGAP8P85298 464 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 TRAF2Q12933 501 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 GRIK2Q13002 908 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 GSE1Q14687 1217 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 UGP2Q16851 508 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 NAPEPLDQ6IQ20 393 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 ZNF662Q6ZS27 426 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 ZC3H18Q86VM9 953 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 OR2I1PQ8NGU4 316 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 NETO1Q8TDF5 533 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 HCAR2Q8TDS4 363 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 CXorf40AQ8TE69 158 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 TFB1MQ8WVM0 346 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 FEM1CQ96JP0 617 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 ALS2CR12Q96Q35 445 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 WRAP53Q9BUR4 548 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 BRD8Q9H0E9 1235 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 KCNF1Q9H3M0 494 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 PCDH12Q9NPG4 1184 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 CDV3Q9UKY7 258 aaKnown RBP23.01■■□□□ 1.27
TDP1-206ENST00000553569 DMTF1Q9Y222 760 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 CA5BQ9Y2D0 317 aa23.01■■□□□ 1.27
TDP1-206ENST00000553569 TRAFD1O14545 582 aaPredicted RBP23■■□□□ 1.27
TDP1-206ENST00000553569 ARHGAP33O14559 1287 aa23■■□□□ 1.27
TDP1-206ENST00000553569 SOCS5O75159 536 aa23■■□□□ 1.27
TDP1-206ENST00000553569 SYPP08247 313 aa23■■□□□ 1.27
TDP1-206ENST00000553569 NUDT1P36639 197 aa23■■□□□ 1.27
TDP1-206ENST00000553569 GRIA4P48058 902 aa23■■□□□ 1.27
TDP1-206ENST00000553569 SEMG2Q02383 582 aa23■■□□□ 1.27
TDP1-206ENST00000553569 PRKD1Q15139 912 aaPredicted RBP23■■□□□ 1.27
TDP1-206ENST00000553569 RSPO4Q2I0M5 234 aaPredicted RBP23■■□□□ 1.27
TDP1-206ENST00000553569 TMEM259Q4ZIN3 620 aa23■■□□□ 1.27
TDP1-206ENST00000553569 RALGPS1Q5JS13 557 aa23■■□□□ 1.27
TDP1-206ENST00000553569 ERAP2Q6P179 960 aa23■■□□□ 1.27
TDP1-206ENST00000553569 ECHDC3Q96DC8 303 aa23■■□□□ 1.27
TDP1-206ENST00000553569 HES6Q96HZ4 224 aa23■■□□□ 1.27
TDP1-206ENST00000553569 PDLIM2Q96JY6 352 aa23■■□□□ 1.27
TDP1-206ENST00000553569 TMEM9BQ9NQ34 198 aa23■■□□□ 1.27
TDP1-206ENST00000553569 AMACRQ9UHK6 382 aa23■■□□□ 1.27
TDP1-206ENST00000553569 ATP8A1Q9Y2Q0 1164 aa23■■□□□ 1.27
TDP1-206ENST00000553569 CACNA1EQ15878 2313 aa23■■□□□ 1.27
TDP1-206ENST00000553569 IGLON5A6NGN9 336 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 APOC4-APOC2K7ER74 178 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 CPP00450 1065 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 APOC2P02655 101 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 ELP6Q0PNE2 266 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 STPG1Q5TH74 334 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 AGAP3Q96P47 875 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 IL12RB2Q99665 862 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 EFR3BQ9Y2G0 817 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 WDR87Q6ZQQ6 2873 aa22.99■■□□□ 1.27
TDP1-206ENST00000553569 C4orf47A7E2U8 309 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 HTRA2O43464 458 aaPredicted RBP22.98■■□□□ 1.27
TDP1-206ENST00000553569 MMP20O60882 483 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 WNT1P04628 370 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 CD38P28907 300 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 AKT2P31751 481 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 SUOXP51687 545 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms