RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SLC22A9Q8IVM8 553 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 DENND6AQ8IWF6 608 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 ZNF683Q8IZ20 524 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 KYQ8NBH2 561 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 MAPK15Q8TD08 544 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 HASPINQ8TF76 798 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 LENG8Q96PV6 779 aaPredicted RBP13.02□□□□□ -0.32
SHMT2-205ENST00000553474 OR52B2Q96RD2 323 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 TRMOQ9BU70 441 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 NMUR1Q9HB89 426 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
SHMT2-205ENST00000553474 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-205ENST00000553474 GRID2O43424 1007 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 ITGB1P05556 798 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 CHRNGP07510 517 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 PIK3R1P27986 724 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 ABCG1P45844 678 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 MPP1Q00013 466 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 RING1Q06587 406 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 CYLC2Q14093 348 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-205ENST00000553474 ACAP2Q15057 778 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 PARP15Q460N3 678 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 PIK3R6Q5UE93 754 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 CEP97Q8IW35 865 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 CEP70Q8NHQ1 597 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 GATA6Q92908 595 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 PPP2R3CQ969Q6 453 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 TADA1Q96BN2 335 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 SPDL1Q96EA4 605 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 TTC1Q99614 292 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 ECSITQ9BQ95 431 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 ZBTB26Q9HCK0 441 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 MRPL40Q9NQ50 206 aaKnown RBP13.02□□□□□ -0.33
SHMT2-205ENST00000553474 NDFIP2Q9NV92 336 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 PDP2Q9P2J9 529 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 RIMKLBQ9ULI2 386 aa13.02□□□□□ -0.33
SHMT2-205ENST00000553474 LOC100653049A0A140TA62 436 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 MROH6A6NGR9 719 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 OR6C75A6NL08 312 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 KRT34O76011 436 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 EPOP01588 193 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 LTA4HP09960 611 aaKnown RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 SAT1P21673 171 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 GMPRP36959 345 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 EPHB1P54762 984 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 YBEYP58557 167 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 TAS2R39P59534 338 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 FAM189BP81408 668 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 IL10RBQ08334 325 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 MAPRE2Q15555 327 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 TRIP4Q15650 581 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 IZUMO2Q6UXV1 221 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 KBTBD6Q86V97 674 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 SCN4BQ8IWT1 228 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 FAM126BQ8IXS8 530 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 NXNL1Q96CM4 212 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 UBXN10Q96LJ8 280 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 OMDQ99983 421 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 FTHL17Q9BXU8 183 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 MFSD1Q9H3U5 465 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 EFCAB1Q9HAE3 211 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 SP110Q9HB58 689 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 ABI2Q9NYB9 513 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 C6orf203Q9P0P8 240 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-205ENST00000553474 ZDHHC2Q9UIJ5 367 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 TTC3P53804 2025 aa13.01□□□□□ -0.33
SHMT2-205ENST00000553474 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
SHMT2-205ENST00000553474 SCN5AQ14524 2016 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 DRGXA6NNA5 263 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 BUD23O43709 281 aaKnown RBP13□□□□□ -0.33
SHMT2-205ENST00000553474 IPO13O94829 963 aaKnown RBP13□□□□□ -0.33
SHMT2-205ENST00000553474 BAG2O95816 211 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 MOCS2O96007 188 aaPredicted RBP13□□□□□ -0.33
SHMT2-205ENST00000553474 PDHA1P08559 390 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 PBX3P40426 434 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 GLRBP48167 497 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 MAPKAPK2P49137 400 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 PFKPQ01813 784 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 TLE2Q04725 743 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 CCNIQ14094 377 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 SEPT6Q14141 434 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 TECRLQ5HYJ1 363 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 MS4A13Q5J8X5 152 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 COLGALT2Q8IYK4 626 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 KDM1BQ8NB78 822 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 PIP4K2CQ8TBX8 421 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms