RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PARGQ86W56 976 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 TMPRSS12Q86WS5 348 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 TSEN2Q8NCE0 465 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 OR4C6Q8NH72 309 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 CENPTQ96BT3 561 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 BTBD6Q96KE9 485 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 CSPG4P5Q96PW8 444 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 DNAJC28Q9NX36 388 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 FREM2Q5SZK8 3169 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 GOLGA4Q13439 2230 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 CSF2P04141 144 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 TPM1P09493 284 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 NME1P15531 152 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 ITIH2P19823 946 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 ACP1P24666 158 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 HNF1BP35680 557 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 RGRP47804 291 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 THOP1P52888 689 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 AP1S1P61966 158 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 POLR2LP62875 67 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 BCL2L1Q07817 233 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 WRAP53Q9BUR4 548 aaKnown RBP13.07□□□□□ -0.32
ACTN1-207ENST00000553290 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 DEF6Q9H4E7 631 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 ETNK2Q9NVF9 386 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 NLGN3Q9NZ94 848 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 CSNK1G3Q9Y6M4 447 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 WDFY3Q8IZQ1 3526 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
ACTN1-207ENST00000553290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-207ENST00000553290 SSU72P8A0A1W2PR75 194 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 CFAP69A5D8W1 941 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 TRIM38O00635 465 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
ACTN1-207ENST00000553290 SCAMP1O15126 338 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 CAPNS1P04632 268 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 JUNDP17535 347 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 IGFALSP35858 605 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
ACTN1-207ENST00000553290 SCNN1BP51168 640 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 CDH6P55285 790 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 SLC10A7Q0GE19 358 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 KRT81Q14533 505 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 ZNF235Q14590 738 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 LRRC14Q15048 493 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 AGERQ15109 404 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 TP53INP2Q8IXH6 220 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 ATPAF2Q8N5M1 289 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 PAF1Q8N7H5 531 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 TP53I13Q8NBR0 393 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-207ENST00000553290 FAM71BQ8TC56 605 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 BTN2A2Q8WVV5 523 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 ECHDC3Q96DC8 303 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 CCDC86Q9H6F5 360 aaKnown RBP13.06□□□□□ -0.32
ACTN1-207ENST00000553290 EVA1BQ9NVM1 165 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
ACTN1-207ENST00000553290 KNTC1P50748 2209 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 MUSKO15146 869 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 FFAR2O15552 330 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 AKR1B10O60218 316 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 MAFKO60675 156 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 PROSCO94903 275 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms