RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 NDUFS3O75489 264 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 NUDT3O95989 172 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 RPN1P04843 607 aaKnown RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 PCNAP12004 261 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 KRT10P13645 584 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 GLULP15104 373 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 TBXAS1P24557 533 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 F2RL1P55085 397 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 RRP1P56182 461 aaKnown RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 PRPF4BQ13523 1007 aaKnown RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 PROSER3Q2NL68 480 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 ASTE1Q2TB18 679 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 CXorf66Q5JRM2 361 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 C1QTNF12Q5T7M4 302 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 PRAMEF17Q5VTA0 474 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 KIAA0930Q6ICG6 404 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 FBXO42Q6P3S6 717 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 ZNF813Q6ZN06 617 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 ZDHHC23Q8IYP9 409 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 MAP4K1Q92918 833 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 ARHGEF26Q96DR7 871 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 SAT2Q96F10 170 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 PIMREGQ9BSJ6 248 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 EFHD1Q9BUP0 239 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 DUSP26Q9BV47 211 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 MARCH4Q9P2E8 410 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 ZHX1Q9UKY1 873 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 NENFQ9UMX5 172 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 AAR2Q9Y312 384 aaKnown RBP5.25□□□□□ -1.57
SCFD1-209ENST00000553280 FAM169AQ9Y6X4 670 aa5.25□□□□□ -1.57
SCFD1-209ENST00000553280 C17orf102A2RUQ5 167 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 DPPA5A6NC42 116 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 DDTLA6NHG4 134 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 KLRF2D3W0D1 207 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 CTDSP2O14595 271 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 SLC25A12O75746 678 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ITGAXP20702 1163 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 SLC16A2P36021 539 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 PMPCAQ10713 525 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 AIMP1Q12904 312 aaKnown RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 TNFAIP1Q13829 316 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 DRAP1Q14919 205 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 COL28A1Q2UY09 1125 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ZSCAN23Q3MJ62 389 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 SUMO4Q6EEV6 95 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ISM2Q6H9L7 571 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 UBE2Q1Q7Z7E8 422 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ZNF575Q86XF7 245 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 TDRPQ86YL5 185 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 MCPH1Q8NEM0 835 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 GABPB2Q8TAK5 448 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 PRPF31Q8WWY3 499 aaKnown RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ATOH1Q92858 354 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ZKSCAN4Q969J2 545 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 TMEM68Q96MH6 324 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 OR2A14Q96R47 310 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 NUF2Q9BZD4 464 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 SIL1Q9H173 461 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 KLK15Q9H2R5 256 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 RANGRFQ9HD47 186 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 WDR6Q9NNW5 1121 aaKnown RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 SLC35C2Q9NQQ7 365 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 CCDC177Q9NQR7 707 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ASB6Q9NWX5 421 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 OGFRQ9NZT2 677 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 ZNHIT2Q9UHR6 403 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 TLK1Q9UKI8 766 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 LAMP3Q9UQV4 416 aa5.24□□□□□ -1.57
SCFD1-209ENST00000553280 LSM4Q9Y4Z0 139 aaKnown RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 FNDC1Q4ZHG4 1894 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-209ENST00000553280 TTBK1Q5TCY1 1321 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 A0A096LPK6 155 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 OR2A25A4D2G3 310 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TSPY2A6NKD2 308 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 C2CD4BA6NLJ0 364 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 FOXO6A8MYZ6 492 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TUBBP07437 444 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TSPY3P0CV98 308 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TSPY8P0CW00 308 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 ZNF182P17025 639 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TMEM11P17152 192 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 CTPS1P17812 591 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SRD5A1P18405 259 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SLC15A1P46059 708 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 GPR12P47775 334 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 NRIP1P48552 1158 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 LMAN1P49257 510 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 CAMPP49913 170 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TERF1P54274 439 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 PMS2P54278 862 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 MFAP4P55083 255 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TUBA4AP68366 448 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TSPY1Q01534 308 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 RUNX2Q13950 521 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 KYNUQ16719 465 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 KRT24Q2M2I5 525 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SOWAHCQ53LP3 525 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TTC39AQ5SRH9 613 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms