RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 RAB23Q9ULC3 237 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 SLC12A4Q9UP95 1085 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 TTLL3Q9Y4R7 772 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PLXND1Q9Y4D7 1925 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 hCG_1818297A0A087WSY0 165 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 A0A1W2PP55 124 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF487B1APH4 448 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 C1QTNF3-AMACRE9PGA6 284 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MCF2LO15068 1137 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MAFKO60675 156 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 NDUFS2O75306 463 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF217O75362 1048 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF821O75541 412 aaPredicted RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 LEFTY1O75610 366 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 IGSF6O95976 241 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ADH1BP00325 375 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PYGMP11217 842 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MX2P20592 715 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 BCKDHBP21953 392 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PEX5P50542 639 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CCNG1P51959 295 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SNRPD1P62314 119 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SLC10A7Q0GE19 358 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 AP1B1Q10567 949 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF235Q14590 738 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ITIH4Q14624 930 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 LBRQ14739 615 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CYTH1Q15438 398 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SPRED3Q2MJR0 410 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 INO80DQ53TQ3 878 aaPredicted RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CMPK2Q5EBM0 449 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 TMCO4Q5TGY1 634 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 GKAP1Q5VSY0 366 aaPredicted RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 KCTD16Q68DU8 428 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 METTL3Q86U44 580 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 VSIG1Q86XK7 387 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 HDDC3Q8N4P3 179 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 OR2AP1Q8NGE2 309 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CENPTQ96BT3 561 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 LGMNQ99538 433 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 DYRK4Q9NR20 520 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 FBXL12Q9NXK8 326 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SEPT10Q9P0V9 454 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 EVLQ9UI08 416 aaPredicted RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SARDHQ9UL12 918 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 NCKAP1Q9Y2A7 1128 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PRR23AA6NEV1 266 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 A6NHS1 94 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 DDX3YO15523 660 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 LILRB5O75023 590 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PRNPP04156 253 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CTSLP07711 333 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 RPSAP08865 295 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CNR2P34972 360 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 P2RY2P41231 377 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ROR2Q01974 943 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 RAD51Q06609 339 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ITKQ08881 620 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 RPS6KA1Q15418 735 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MYLK3Q32MK0 819 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 FAM182AQ5T1J6 154 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 MARC1Q5VT66 337 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 FAM46CQ5VWP2 391 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 KBTBD6Q86V97 674 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ZC3H18Q86VM9 953 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 TMEFF1Q8IYR6 380 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 BBS5Q8N3I7 341 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 TEX9Q8N6V9 391 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CASKIN2Q8WXE0 1202 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ISG20Q96AZ6 181 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 TOE1Q96GM8 510 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 HES6Q96HZ4 224 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 HEPHQ9BQS7 1158 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 OSBPL8Q9BZF1 889 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 CNOT10Q9H9A5 744 aaKnown RBP10.07□□□□□ -0.8
LETMD1-234ENST00000552645 NT5MQ9NPB1 228 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 ITM2CQ9NQX7 267 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 LHX3Q9UBR4 397 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SERGEFQ9UGK8 458 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 SEPT3Q9UH03 358 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 PPM1HQ9ULR3 514 aa10.07□□□□□ -0.8
LETMD1-234ENST00000552645 USP34Q70CQ2 3546 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
LETMD1-234ENST00000552645 KCNK1O00180 336 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 ALOX15BO15296 676 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 INSIG1O15503 277 aa10.06□□□□□ -0.8
LETMD1-234ENST00000552645 GJB3O75712 270 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms