RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	ANKRD42	Q8N9B4	389 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	BANP	Q8N9N5	519 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	BRSK1	Q8TDC3	778 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	PEX13	Q92968	403 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	ISG20	Q96AZ6	181 aa	Known RBP	12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	SGSM3	Q96HU1	749 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	SERAC1	Q96JX3	654 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	RBBP8	Q99708	897 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	FAM167B	Q9BTA0	163 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	ADGRE3	Q9BY15	652 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	CEP44	Q9C0F1	390 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	LMCD1	Q9NZU5	365 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	SLC2A6	Q9UGQ3	507 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	FBXO10	Q9UK96	956 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	CDH7	Q9ULB5	785 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	PSAT1	Q9Y617	370 aa		12.79	□□□□□ -0.36
CACNB3-223	ENST00000552480	HMX2	A2RU54	273 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	HEPACAM2	A8MVW5	462 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	LDB2	O43679	373 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	RFPL1	O75677	317 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ZWINT	O95229	277 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	VAPB	O95292	243 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	GSR	P00390	522 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ITGA2B	P08514	1039 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	FCAR	P24071	287 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ARNT	P27540	789 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	CTSO	P43234	321 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	LIMK2	P53671	638 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	PPARD	Q03181	441 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ACVR1	Q04771	509 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	THOC5	Q13769	683 aa	Known RBP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	SMAD1	Q15797	465 aa	Known RBP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	CNGA3	Q16281	694 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	MROH9	Q5TGP6	573 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	C22orf39	Q6P5X5	142 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	SH2D5	Q6ZV89	423 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	STRA8	Q7Z7C7	330 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	AHI1	Q8N157	1196 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	LPCAT1	Q8NF37	534 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	BLOC1S5	Q8TDH9	187 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	DENND1A	Q8TEH3	1009 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	WFIKKN2	Q8TEU8	576 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ATP2A3	Q93084	1043 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	E2F7	Q96AV8	911 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	RMDN1	Q96DB5	314 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ASIC4	Q96FT7	647 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	APOPT1	Q96IL0	206 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	AGAP2	Q99490	1192 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	MCMBP	Q9BTE3	642 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	TM6SF2	Q9BZW4	377 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	ZNF576	Q9H609	170 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	CCDC134	Q9H6E4	229 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	THG1L	Q9NWX6	298 aa	Known RBP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	MKS1	Q9NXB0	559 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	PCDHGC4	Q9Y5F7	938 aa		12.78	□□□□□ -0.36
CACNB3-223	ENST00000552480	TM9SF1	O15321	606 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	SLC7A4	O43246	635 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	TIMM44	O43615	452 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	FZD6	O60353	706 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	SOCS5	O75159	536 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ZNF821	O75541	412 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	CRTAM	O95727	393 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	PDHA1	P08559	390 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	PYGB	P11216	843 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	STK19	P49842	368 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	NEK3	P51956	506 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	RPL26	P61254	145 aa	Known RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	SNRPD1	P62314	119 aa	Known RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ECT2L	Q008S8	904 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	BCL2L1	Q07817	233 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	PDGFRL	Q15198	375 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	TAF1A	Q15573	450 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	UGP2	Q16851	508 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ATAT1	Q5SQI0	421 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ARMC12	Q5T9G4	340 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	MBLAC2	Q68D91	279 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	TRIM68	Q6AZZ1	485 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ADIPOR2	Q86V24	386 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	PCDH20	Q8N6Y1	951 aa	Known RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	OR2AP1	Q8NGE2	309 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	OR13J1	Q8NGT2	312 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	CALML6	Q8TD86	181 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	MGARP	Q8TDB4	240 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ACMSD	Q8TDX5	336 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	MYO19	Q96H55	970 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	TUBGCP5	Q96RT8	1024 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	KLF6	Q99612	283 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	PRO3102	Q9H379	93 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	MFSD1	Q9H3U5	465 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	EVL	Q9UI08	416 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	GGT7	Q9UJ14	662 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	CDH22	Q9UJ99	828 aa		12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	RPL26L1	Q9UNX3	145 aa	Known RBP	12.77	□□□□□ -0.37
CACNB3-223	ENST00000552480	ANKRD66	B4E2M5	251 aa		12.76	□□□□□ -0.37
CACNB3-223	ENST00000552480	GOLGA8T	H3BQL2	631 aa		12.76	□□□□□ -0.37
CACNB3-223	ENST00000552480	GOLGA8R	I6L899	631 aa		12.76	□□□□□ -0.37
CACNB3-223	ENST00000552480	COPE	O14579	308 aa		12.76	□□□□□ -0.37
CACNB3-223	ENST00000552480	HTRA2	O43464	458 aa	Predicted RBP	12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms