RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 YY1AP1Q9H869 796 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 COQ10BQ9H8M1 238 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 XPNPEP3Q9NQH7 507 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PSD3Q9NYI0 1048 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MTUS1Q9ULD2 1270 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 NENFQ9UMX5 172 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 AGAP1Q9UPQ3 857 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CDYLQ9Y232 598 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 HPSEQ9Y251 543 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ATP11BQ9Y2G3 1177 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CAPN7Q9Y6W3 813 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 IL16Q14005 1332 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 A0A1W2PQF6 199 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 XKRY2A2RUG3 117 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 DENND3A2RUS2 1198 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 AQP7P3A6NL99 342 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 RASGRF2O14827 1237 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ADAMDEC1O15204 470 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ZNF185O15231 689 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 CYTIPO60759 359 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 RECQL4O94761 1208 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 AKR7A3O95154 331 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PTBP3O95758 552 aaKnown RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 CER1O95813 267 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PDGFBP01127 241 aaPredicted RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 URODP06132 367 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ZFYP08048 801 aaPredicted RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 CYC1P08574 325 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 C1SP09871 688 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 COX7A2P14406 83 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ETS1P14921 441 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 GYPEP15421 78 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 CDH3P22223 829 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PTPN7P35236 360 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 CCR3P51677 355 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 KCNQ1P51787 676 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PMS2P54278 862 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 HHEXQ03014 270 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 GPM6BQ13491 265 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PABPC1LQ4VXU2 614 aaKnown RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 CRB2Q5IJ48 1285 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ABLIM2Q6H8Q1 611 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 LRIG3Q6UXM1 1119 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 MED25Q71SY5 747 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 KCTD9Q7L273 389 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ARMC9Q7Z3E5 817 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TRABD2AQ86V40 505 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 FSTL5Q8N475 847 aaPredicted RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 CAMKVQ8NCB2 501 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 LPCAT1Q8NF37 534 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TNIP2Q8NFZ5 429 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 METTL21AQ8WXB1 218 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 SMARCE1Q969G3 411 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 EDC3Q96F86 508 aaKnown RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 FAM227BQ96M60 508 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 GDAP1L1Q96MZ0 367 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 GNRHR2Q96P88 292 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 CD180Q99467 661 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PIMREGQ9BSJ6 248 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 NFKBIZQ9BYH8 718 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 PUS3Q9BZE2 481 aaKnown RBP4.29□□□□□ -1.72
USP44-208ENST00000552440 FAM83DQ9H4H8 585 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 WDR26Q9H7D7 661 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 POLR1BQ9H9Y6 1135 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 FANCEQ9HB96 536 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TMEM51Q9NW97 253 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 NCDNQ9UBB6 729 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 SPASTQ9UBP0 616 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 FBXL17Q9UF56 701 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TEKT2Q9UIF3 430 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 RCOR1Q9UKL0 485 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 MTMR6Q9Y217 621 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 TNFSF13BQ9Y275 285 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 NAALAD2Q9Y3Q0 740 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 LIPGQ9Y5X9 500 aa4.29□□□□□ -1.72
USP44-208ENST00000552440 C2orf78A6NCI8 922 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 LDLRAD4O15165 306 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ZSCAN9O15535 394 aaPredicted RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 TEX33O43247 280 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SPOPO43791 374 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SLCO2B1O94956 709 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KCNK5O95279 499 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KLKB1P03952 638 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CYP1A2P05177 515 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 POLR2MP0CAP2 368 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PRLRP16471 622 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SFPQP23246 707 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP44-208ENST00000552440 GLRA2P23416 452 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PNPLA4P41247 253 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ETV4P43268 484 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KIR2DL3P43628 341 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SNU13P55769 128 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms