RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PCDH15Q96QU1 1955 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 ANKRD36A6QL64 1941 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 KNL1Q8NG31 2342 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 TSPAN11A1L157 253 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 C10orf142B7Z368 130 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 CCDC175P0C221 793 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 KRT10P13645 584 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 CCNB1P14635 433 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 TIMP2P16035 220 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 HNRNPA2B1P22626 353 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 CTNNA2P26232 953 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 NR2C2P49116 596 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 RWDD2BP57060 319 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 POLR2LP62875 67 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 PPIDQ08752 370 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 SGCGQ13326 291 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 PPP2R5EQ16537 467 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 ZNF284Q2VY69 593 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 PGBD5Q8N414 524 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 TEX26Q8N6G2 289 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 UBL4BQ8N7F7 174 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 LRRC57Q8N9N7 239 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 PDCD6IPQ8WUM4 868 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 MAML1Q92585 1016 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 LGMNQ99538 433 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 BRD8Q9H0E9 1235 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 DLL3Q9NYJ7 618 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 AMACRQ9UHK6 382 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 ANKRD6Q9Y2G4 727 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 PCDHA3Q9Y5H8 950 aa18.65■□□□□ 0.58
PRPF40B-216ENST00000552301 hCG_1818297A0A087WSY0 165 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 A0A0U1RQJ8 604 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 A0A1W2PQ67 120 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 CDX4O14627 284 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 AREL1O15033 823 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 VILLO15195 856 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 MAGEC1O60732 1142 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 SOCS5O75159 536 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 GJB3O75712 270 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 CR2P20023 1033 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 NFKBIAP25963 317 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 COPS2P61201 443 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 TAZQ16635 292 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 UGP2Q16851 508 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 KIF19Q2TAC6 998 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 TMEM259Q4ZIN3 620 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 NPNTQ6UXI9 565 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 LRRN4Q8WUT4 740 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 P3H4Q92791 437 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 VOPP1Q96AW1 172 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 SEMA3CQ99985 751 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 C1QTNF7Q9BXJ2 289 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 SLC17A9Q9BYT1 436 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 NOD2Q9HC29 1040 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 SEPT10Q9P0V9 454 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 GGT7Q9UJ14 662 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 GUCA1BQ9UMX6 200 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 ZFR2Q9UPR6 939 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 WDR87Q6ZQQ6 2873 aa18.64■□□□□ 0.57
PRPF40B-216ENST00000552301 TTC24A2A3L6 582 aaPredicted RBP18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 MIF4GDA9UHW6 222 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 KCNK1O00180 336 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 FTCDO95954 541 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 CPP00450 1065 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 PTMAP06454 111 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 CA4P22748 312 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 CES1P23141 567 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 NT5DC3Q86UY8 548 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 MFSD2AQ8NA29 543 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 OR2I1PQ8NGU4 316 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 OLFM3Q96PB7 478 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 WRAP53Q9BUR4 548 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 GAREM1Q9H706 876 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 FZD3Q9NPG1 666 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 PCDH12Q9NPG4 1184 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 GDF3Q9NR23 364 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 SPTBN4Q9H254 2564 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 FRYLO94915 3013 aa18.63■□□□□ 0.57
PRPF40B-216ENST00000552301 DOCK9Q9BZ29 2069 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 IGLON5A6NGN9 336 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 SPINT1O43278 529 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 TM7SF2O76062 418 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 JCHAINP01591 159 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 HLA-DQB2P05538 268 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 KCNA4P22459 653 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 FAM193AP78312 1265 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 IFI35P80217 286 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 CCZ1BP86790 482 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 CCZ1P86791 482 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 OVGP1Q12889 678 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 HLA-BQ31612 363 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 IQCHQ86VS3 1027 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 TFB1MQ8WVM0 346 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 HAUS1Q96CS2 278 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 ECHDC3Q96DC8 303 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 HEMGNQ9BXL5 484 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 CA5BQ9Y2D0 317 aa18.62■□□□□ 0.57
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