RNA–Protein interactions for RNA: ENST00000552259.5

CPNE8-209, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-209ENST00000552259 EPHX3Q9H6B9 360 aa3.37□□□□□ -1.87
CPNE8-209ENST00000552259 SMARCAL1Q9NZC9 954 aa3.37□□□□□ -1.87
CPNE8-209ENST00000552259 HDAC6Q9UBN7 1215 aa3.37□□□□□ -1.87
CPNE8-209ENST00000552259 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
CPNE8-209ENST00000552259 TCF20Q9UGU0 1960 aaKnown RBP3.36□□□□□ -1.87
CPNE8-209ENST00000552259 A0A0B4J293 547 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 CPED1A4D0V7 1026 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 PRSS47A8MTI9 375 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 TIMM23O14925 209 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 CLGNO14967 610 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 SLC25A17O43808 307 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 ATP2C2O75185 946 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 SLC2A4P14672 509 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 RYKP34925 604 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 DLX5P56178 289 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 ACSM2AQ08AH3 577 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 ITGADQ13349 1161 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 TNFAIP1Q13829 316 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 NEDD9Q14511 834 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 ARHGEF6Q15052 776 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 CCDC6Q16204 474 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 GRAMD1BQ3KR37 738 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 MAP3K21Q5TCX8 1036 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 HERC6Q8IVU3 1022 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 NKAPQ8N5F7 415 aaKnown RBP3.36□□□□□ -1.87
CPNE8-209ENST00000552259 LMNTD1Q8N9Z9 388 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 C11orf65Q8NCR3 313 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 COG8Q96MW5 612 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 GAREM1Q9H706 876 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 SMYD2Q9NRG4 433 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 CYSLTR2Q9NS75 346 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 SLCO3A1Q9UIG8 710 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 VDAC3Q9Y277 283 aa3.36□□□□□ -1.87
CPNE8-209ENST00000552259 CBY3A6NI87 242 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 FAM90A7PA6NKC0 464 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 FAM90A22PA8MWA6 464 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 FAM90A12PA8MX19 464 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 FAM90A23PA8MXZ1 464 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 PER2O15055 1255 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 KLK10O43240 276 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 LDHAP00338 332 aaKnown RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 AMD1P17707 334 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 DDX5P17844 614 aaKnown RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SRD5A1P18405 259 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 PSMC2P35998 433 aaKnown RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TRAPPC10P48553 1259 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SLC12A1Q13621 1099 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 NAA25Q14CX7 972 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ATP13A5Q4VNC0 1218 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 WDR45BQ5MNZ6 344 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 C10orf62Q5T681 223 aaPredicted RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 FAM69BQ5VUD6 431 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 NAPEPLDQ6IQ20 393 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 CES5AQ6NT32 575 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 RETSATQ6NUM9 610 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 RHBDF2Q6PJF5 856 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 KRBA2Q6ZNG9 492 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TUBA1AQ71U36 451 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ADGRG6Q86SQ4 1221 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 LURAP1LQ8IV03 231 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ANKRD18AQ8IVF6 992 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SCCPDHQ8NBX0 429 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SECTM1Q8WVN6 248 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SNAPC3Q92966 411 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ZC3HAV1LQ96H79 300 aaKnown RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ZSCAN31Q96LW9 406 aaPredicted RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 SLITRK1Q96PX8 696 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TWNKQ96RR1 684 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TUBA1CQ9BQE3 449 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 HERPUD2Q9BSE4 406 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 UBTD1Q9HAC8 227 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 EBF2Q9HAK2 575 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TCF7L2Q9NQB0 619 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 ZNF224Q9NZL3 707 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 IL1RAPL1Q9NZN1 696 aa3.35□□□□□ -1.87
CPNE8-209ENST00000552259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.35□□□□□ -1.87
CPNE8-209ENST00000552259 IGHV4OR15-8A0A075B7B6 117 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 A0A0U1RQF3 1178 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 B9A039 149 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 AKR1B15C9JRZ8 316 aaPredicted RBP3.34□□□□□ -1.87
CPNE8-209ENST00000552259 BMPR1BO00238 502 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 IRF1P10914 325 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 SRCP12931 536 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 DGKAP23743 735 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 MCM3P25205 808 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 POU1F1P28069 291 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 STX2P32856 288 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 UBE3AQ05086 875 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 GRSF1Q12849 480 aaKnown RBP eCLIP3.34□□□□□ -1.87
CPNE8-209ENST00000552259 PPFIA1Q13136 1202 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 DHX34Q14147 1143 aaKnown RBP3.34□□□□□ -1.87
CPNE8-209ENST00000552259 KRT24Q2M2I5 525 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 AMZ1Q400G9 498 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 FAM76BQ5HYJ3 339 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 SERTAD4-AS1Q5TG53 156 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 C17orf99Q6UX52 265 aa3.34□□□□□ -1.87
CPNE8-209ENST00000552259 BBS12Q6ZW61 710 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms