RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ABI3BPQ7Z7G0 1075 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 VASH2Q86V25 355 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 IQCHQ86VS3 1027 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC35F3Q8IY50 421 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC185Q8N715 623 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF557Q8N988 423 aaPredicted RBP6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 Q8N9G6 341 aaPredicted RBP6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM181AQ8N9Y4 354 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 KCNE4Q8WWG9 221 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 RFFLQ8WZ73 363 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 IFT43Q96FT9 208 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 KLHL32Q96NJ5 620 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PDCL3Q9H2J4 239 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 DYRK4Q9NR20 520 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 METTL5Q9NRN9 209 aaKnown RBP6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ATXN7L1Q9ULK2 861 aaPredicted RBP6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 DMTF1Q9Y222 760 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ATP6V1DQ9Y5K8 247 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ENTPD2Q9Y5L3 495 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 SPTA1P02549 2419 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 A0A0U1RQS6 177 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SPTY2D1-AS1A0A0U1RR47 76 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 BICDL2A1A5D9 508 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 A6NNZ2 444 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NEMP1O14524 444 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 EPHB6O15197 1021 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 YY2O15391 372 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 YKT6O15498 198 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC7A4O43246 635 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 AQP9O43315 295 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 GFPT2O94808 682 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 TNFSF15O95150 251 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CSF2P04141 144 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 PRNPP04156 253 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC2A3P11169 496 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CYP11B1P15538 503 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 TSHRP16473 764 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CHRNB2P17787 502 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 WT1P19544 449 aaPredicted RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 L1CAMP32004 1257 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SERPINH1P50454 418 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NEK3P51956 506 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 MARSP56192 900 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 PCBP4P57723 403 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 KRT83P78385 493 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CCL7P80098 99 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 GNA12Q03113 381 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SGCGQ13326 291 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 C5orf22Q49AR2 442 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 MIIPQ5JXC2 388 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 TTC39BQ5VTQ0 682 aaPredicted RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 BEND5Q7L4P6 421 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF354CQ86Y25 554 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 PELI3Q8N2H9 469 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 EXD3Q8N9H8 876 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 DCAF4L2Q8NA75 395 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 KYQ8NBH2 561 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC34Q96HJ3 373 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NSMCE3Q96MG7 304 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 DEPDC7Q96QD5 511 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 HEPHQ9BQS7 1158 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 LRRC61Q9BV99 259 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 HDAC8Q9BY41 377 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 POLR1BQ9H9Y6 1135 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 EPB41L5Q9HCM4 733 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 SAMSN1Q9NSI8 373 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 GPATCH2LQ9NWQ4 482 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 TAB2Q9NYJ8 693 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NLGN3Q9NZ94 848 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 OR1A2Q9Y585 309 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
PRPF40B-214ENST00000551320 NBASA2RRP1 2371 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 IGLV3-10A0A075B6K4 115 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 J3QKU1 62 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ALOX15BO15296 676 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 BUB1O43683 1085 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 GLI1P08151 1106 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ITIH1P19827 911 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ITGB7P26010 798 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ETFBP38117 255 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ETV5P41161 510 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 RECQLP46063 649 aaPredicted RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 LSSP48449 732 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 RPS21P63220 83 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 E2F1Q01094 437 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ILKQ13418 452 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 IRF4Q15306 451 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 HIF1AQ16665 826 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 KLHL40Q2TBA0 621 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 DPCR1Q3MIW9 517 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC25A52Q3SY17 297 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC14Q49A88 953 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 HS1BP3Q53T59 392 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 EFHC2Q5JST6 749 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms