RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 AMACRQ9UHK6 382 aa15.57■□□□□ 0.08
PRPF40B-211ENST00000551063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRPF40B-211ENST00000551063 PCDHGB2Q9Y5G2 931 aa15.57■□□□□ 0.08
PRPF40B-211ENST00000551063 SNX11Q9Y5W9 270 aa15.57■□□□□ 0.08
PRPF40B-211ENST00000551063 TRAFD1O14545 582 aaPredicted RBP15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 WNT9AO14904 365 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 MATN3O15232 486 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 SLC31A1O15431 190 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 DFNA5O60443 496 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 MAP3K6O95382 1288 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 CDKN2BP42772 138 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 NXPH1P58417 271 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 KIF5AQ12840 1032 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 TFDP2Q14188 446 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 UGP2Q16851 508 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 ALG1LQ6GMV1 187 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 PSAPL1Q6NUJ1 521 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 ERAP2Q6P179 960 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 MFSD7Q6UXD7 560 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 RFX6Q8HWS3 928 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 CCDC13Q8IYE1 715 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 PGBD5Q8N414 524 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 CCDC112Q8NEF3 446 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 DENND6BQ8NEG7 585 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 RBM41Q96IZ5 413 aaKnown RBP15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 C1QTNF2Q9BXJ5 285 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 SLC17A9Q9BYT1 436 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 POLR1EQ9GZS1 481 aaKnown RBP15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 SCUBE2Q9NQ36 999 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 GGT7Q9UJ14 662 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 ITM2BQ9Y287 266 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 FNDC3AQ9Y2H6 1198 aaKnown RBP15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 ATP8A1Q9Y2Q0 1164 aa15.56■□□□□ 0.08
PRPF40B-211ENST00000551063 KNL1Q8NG31 2342 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 TLR4O00206 839 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 PPP1R12AO14974 1030 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 CEACAM1P13688 526 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 CTNNA1P35221 906 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 CCT8P50990 548 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 NAP1L1P55209 391 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 PPIDQ08752 370 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 SLC10A2Q12908 348 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 FGL2Q14314 439 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 PDK1Q15118 436 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 PPP2R5EQ16537 467 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 TMEM52BQ4KMG9 183 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 SPOCD1Q6ZMY3 1216 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 PIP4P1Q86T03 277 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 ZSWIM9Q86XI8 627 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 OXR1Q8N573 874 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 CXorf40AQ8TE69 158 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 KLK6Q92876 244 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 OLFM3Q96PB7 478 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 ELF4Q99607 663 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 DESI2Q9BSY9 194 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 BRD8Q9H0E9 1235 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 SLC32A1Q9H598 525 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 TM7SF3Q9NS93 570 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 HS3ST3A1Q9Y663 406 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 DUSP10Q9Y6W6 482 aa15.55■□□□□ 0.08
PRPF40B-211ENST00000551063 EPG5Q9HCE0 2579 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 ASCC3Q8N3C0 2202 aaKnown RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 H0Y8X5 98 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 YKT6O15498 198 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 ARHGAP6O43182 974 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 HTRA2O43464 458 aaPredicted RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 ZRANB2O95218 330 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 CD59P13987 128 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 TGM2P21980 687 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 CES1P23141 567 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 CTNNA2P26232 953 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 MMP12P39900 470 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 MARCKSL1P49006 195 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 NR2C2P49116 596 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 MAXP61244 160 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 POLR2LP62875 67 aaKnown RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 SGCGQ13326 291 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 TFDP3Q5H9I0 405 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 LRRC73Q5JTD7 316 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 KYAT3Q6YP21 454 aaKnown RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 GCNT7Q6ZNI0 430 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 BZW1Q7L1Q6 419 aaKnown RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 ABI3BPQ7Z7G0 1075 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 RCOR2Q8IZ40 523 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 LRRC57Q8N9N7 239 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 KIAA1524Q8TCG1 905 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 KRT35Q92764 455 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 LENG8Q96PV6 779 aaPredicted RBP15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 C1QTNF7Q9BXJ2 289 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 ERVMER34-1Q9H9K5 563 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 IL21RQ9HBE5 538 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 NOD2Q9HC29 1040 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 NT5MQ9NPB1 228 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 FZD3Q9NPG1 666 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 PCDH12Q9NPG4 1184 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 HEY1Q9Y5J3 304 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 LAMA1P25391 3075 aa15.54■□□□□ 0.08
PRPF40B-211ENST00000551063 CACNA1BQ00975 2339 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms