RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 C1QL1O75973 258 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 TSHRP16473 764 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 CHRNB2P17787 502 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 TPRG1LQ5T0D9 272 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 WDR59Q6PJI9 974 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 GKN2Q86XP6 184 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 DNAAF5Q86Y56 855 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 ZNF843Q8N446 348 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 C3orf20Q8ND61 904 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 OR6C4Q8NGE1 309 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 WRAP53Q9BUR4 548 aaKnown RBP23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 LRRC61Q9BV99 259 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 CPNE5Q9HCH3 593 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 GULP1Q9UBP9 304 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 BPTFQ12830 3046 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 YY2O15391 372 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 FGF10O15520 208 aaPredicted RBP23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 TIMP2P16035 220 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 JAM2P57087 298 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 TMEM52BQ4KMG9 183 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 CRTC1Q6UUV9 634 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 PHF13Q86YI8 300 aaPredicted RBP23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 SLC35F3Q8IY50 421 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 ARL10Q8N8L6 244 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 CCDC3Q9BQI4 270 aa23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 TCEAL2Q9H3H9 227 aaPredicted RBP23.32■■□□□ 1.32
SMARCD1-209ENST00000550477 CCDC187A0A096LP49 1063 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 RASA4BC9J798 803 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 RASA4O43374 803 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 RASGRP1O95267 797 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 CCDC172P0C7W6 258 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 HK3P52790 923 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 SERINC3Q13530 473 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 KRT31Q15323 416 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 LRRC73Q5JTD7 316 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 PERM1Q5SV97 790 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 DNAJC24Q6P3W2 148 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 HID1Q8IV36 788 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 TP53I13Q8NBR0 393 aaPredicted RBP23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 NEK11Q8NG66 645 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 ZNF641Q96N77 438 aaPredicted RBP23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 MAGEB5Q9BZ81 275 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 STRADBQ9C0K7 418 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 MBNL1Q9NR56 388 aaKnown RBP23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 UBA2Q9UBT2 640 aaPredicted RBP23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 NEU3Q9UQ49 428 aa23.31■■□□□ 1.32
SMARCD1-209ENST00000550477 WASH4PA8MWX3 477 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 GJB6O95452 261 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 HTR7P34969 479 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 ZNF143P52747 638 aaPredicted RBP23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 EIF3IQ13347 325 aaKnown RBP23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 UGP2Q16851 508 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 CLEC16AQ2KHT3 1053 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 DCUN1D2Q6PH85 259 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 BRAT1Q6PJG6 821 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 ENPP7Q6UWV6 458 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 UMODL1-AS1Q8N2C9 162 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 PAF1Q8N7H5 531 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 HMCESQ96FZ2 354 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 EDEM3Q9BZQ6 932 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 SUV39H2Q9H5I1 410 aa23.3■■□□□ 1.32
SMARCD1-209ENST00000550477 TNFSF15O95150 251 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 KLK7P49862 253 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 C1QBPQ07021 282 aaKnown RBP23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 PTP4A2Q12974 167 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 IRF4Q15306 451 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 CCDC81Q6ZN84 652 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 RD3Q7Z3Z2 195 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 PYROXD2Q8N2H3 581 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 CNPY3Q9BT09 278 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 APOOQ9BUR5 198 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 KLQ9UEF7 1012 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 FZD10Q9ULW2 581 aa23.29■■□□□ 1.32
SMARCD1-209ENST00000550477 CDRT15L2A8MXV6 281 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 CCP110O43303 1012 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 TNFP01375 233 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 ITGA2BP08514 1039 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 PLA2G2AP14555 144 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 TPI1P60174 286 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 NFATC4Q14934 902 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 PPP1R2P3Q6NXS1 205 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 SNRNP27Q8WVK2 155 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 LIN37Q96GY3 246 aaPredicted RBP23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 GFM1Q96RP9 751 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 TUBGCP5Q96RT8 1024 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 PCDHB18PQ96TA0 734 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 CLPBQ9H078 707 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 NOL6Q9H6R4 1146 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 GPR34Q9UPC5 381 aa23.28■■□□□ 1.32
SMARCD1-209ENST00000550477 ITIH2P19823 946 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 SRP54P61011 504 aaKnown RBP23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 POLR2LP62875 67 aaKnown RBP23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 WSCD2Q2TBF2 565 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 CDKAL1Q5VV42 579 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 TSACCQ96A04 125 aaPredicted RBP23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 MCEEQ96PE7 176 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 AGPAT1Q99943 283 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 WDR70Q9NW82 654 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 SIRPGQ9P1W8 387 aa23.27■■□□□ 1.32
SMARCD1-209ENST00000550477 GCN1Q92616 2671 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms