RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 C6orf106Q9H6K1 298 aaPredicted RBP17.36■□□□□ 0.37
BRF1-217ENST00000550375 HOMER3Q9NSC5 361 aa17.36■□□□□ 0.37
BRF1-217ENST00000550375 DKK3Q9UBP4 350 aa17.36■□□□□ 0.37
BRF1-217ENST00000550375 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
BRF1-217ENST00000550375 PCDHB9Q9Y5E1 797 aa17.36■□□□□ 0.37
BRF1-217ENST00000550375 GON4LQ3T8J9 2241 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3DA0A087WVF3 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3IA0A087WXS9 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3EA0A087X179 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3KA0A087X1G2 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TSPAN11A1L157 253 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3FA6NER0 549 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 C5orf60A6NFR6 353 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 LRRC72A6NJI9 287 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3LB9A6J9 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 SLC7A4O43246 635 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 PLRG1O43660 514 aaKnown RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 SOCS5O75159 536 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 MT-CYBP00156 380 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 CPP00450 1065 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 IFNB1P01574 187 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 ITGAVP06756 1048 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3HP0C7X1 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 SEMG2Q02383 582 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 PCSK7Q16549 785 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 PLK5Q496M5 336 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 ARMC12Q5T9G4 340 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3GQ6DHY5 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3CQ6IPX1 549 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 DRICH1Q6PGQ1 229 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 BRAT1Q6PJG6 821 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 ARHGEF18Q6ZSZ5 1173 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 LPCAT2Q7L5N7 544 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 PRUNE1Q86TP1 453 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 C11orf74Q86VG3 221 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 ZSCAN30Q86W11 494 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 TBC1D3Q8IZP1 549 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 TAB3Q8N5C8 712 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 HCAR2Q8TDS4 363 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 MAGOHBQ96A72 148 aaKnown RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 ECHDC3Q96DC8 303 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 DUSP15Q9H1R2 295 aaPredicted RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 GBA3Q9H227 469 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 GGT7Q9UJ14 662 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 ITM2BQ9Y287 266 aa17.35■□□□□ 0.37
BRF1-217ENST00000550375 DRG1Q9Y295 367 aaKnown RBP17.35■□□□□ 0.37
BRF1-217ENST00000550375 UPK3BL1B0FP48 263 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 UPK3BL2E5RIL1 263 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 NEMP1O14524 444 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
BRF1-217ENST00000550375 OPHN1O60890 802 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 PMPCBO75439 489 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 GCATO75600 419 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 FSBPO95073 299 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 PCDH8O95206 1070 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 PGLSO95336 258 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 PDHA1P08559 390 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 ETS1P14921 441 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 PSMB4P28070 264 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 STIP1P31948 543 aaKnown RBP17.34■□□□□ 0.37
BRF1-217ENST00000550375 DHPSP49366 369 aaPredicted RBP17.34■□□□□ 0.37
BRF1-217ENST00000550375 ELF2Q15723 593 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 UGP2Q16851 508 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 KCTD19Q17RG1 926 aaPredicted RBP17.34■□□□□ 0.37
BRF1-217ENST00000550375 GSTA5Q7RTV2 222 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 CCDC89Q8N998 374 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 OR2T34Q8NGX1 318 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 FCRL5Q96RD9 977 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 TDRD1Q9BXT4 1180 aaKnown RBP17.34■□□□□ 0.37
BRF1-217ENST00000550375 FADS3Q9Y5Q0 445 aa17.34■□□□□ 0.37
BRF1-217ENST00000550375 TRPM6Q9BX84 2022 aa17.33■□□□□ 0.37
BRF1-217ENST00000550375 GOLGA6L10A0A0M3HER8 536 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 SPINT1O43278 529 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 RHOBTB1O94844 696 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 CTPS1P17812 591 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 CA4P22748 312 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 PAFAH1B1P43034 410 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 POLR2LP62875 67 aaKnown RBP17.33■□□□□ 0.36
BRF1-217ENST00000550375 FAM193AP78312 1265 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 PMS2CLQ68D20 193 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 TTC27Q6P3X3 843 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 SLC41A1Q8IVJ1 513 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 LPCAT1Q8NF37 534 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 SNX19Q92543 992 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 RAB7BQ96AH8 199 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 RTP4Q96DX8 246 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 OXNAD1Q96HP4 312 aaPredicted RBP17.33■□□□□ 0.36
BRF1-217ENST00000550375 HSPA12BQ96MM6 686 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 PCDH9Q9HC56 1237 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 PCDH12Q9NPG4 1184 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 FAM153AQ9UHL3 310 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 LRRK1Q38SD2 2015 aa17.33■□□□□ 0.36
BRF1-217ENST00000550375 TNRC6BQ9UPQ9 1833 aaKnown RBP17.32■□□□□ 0.36
BRF1-217ENST00000550375 MEI4A8MW99 385 aa17.32■□□□□ 0.36
BRF1-217ENST00000550375 A8MX80 341 aa17.32■□□□□ 0.36
BRF1-217ENST00000550375 PDE2AO00408 941 aaPredicted RBP17.32■□□□□ 0.36
BRF1-217ENST00000550375 FZD6O60353 706 aa17.32■□□□□ 0.36
BRF1-217ENST00000550375 RNGTTO60942 597 aaKnown RBP17.32■□□□□ 0.36
BRF1-217ENST00000550375 PHF2O75151 1096 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms