RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 NEK5Q6P3R8 708 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 BRAT1Q6PJG6 821 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 TRIM69Q86WT6 500 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 KLK6Q92876 244 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 ECHDC3Q96DC8 303 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 FEM1CQ96JP0 617 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 QKIQ96PU8 341 aaKnown RBP eCLIP22.73■■□□□ 1.23
BRF1-216ENST00000550208 ZFR2Q9UPR6 939 aaKnown RBP22.73■■□□□ 1.23
BRF1-216ENST00000550208 RIF1Q5UIP0 2472 aaKnown RBP22.73■■□□□ 1.23
BRF1-216ENST00000550208 ANKRD36A6QL64 1941 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 A0A1W2PPC4 97 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 GOLGA6L9A6NEM1 432 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 AREL1O15033 823 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 HTRA2O43464 458 aaPredicted RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 LRP3O75074 770 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 XPAP23025 273 aaPredicted RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 RBL1P28749 1068 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 DPP6P42658 865 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 WASHC5Q12768 1159 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 SF3A2Q15428 464 aaKnown RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 SLC45A4Q5BKX6 768 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 SEL1L2Q5TEA6 688 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 SEL1L3Q68CR1 1132 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 TCEAL6Q6IPX3 200 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 PRPF39Q86UA1 669 aaKnown RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 HORMAD1Q86X24 394 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 ZCCHC9Q8N567 271 aaKnown RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 PAF1Q8N7H5 531 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 PDCD6IPQ8WUM4 868 aaKnown RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 TCEAL3Q969E4 200 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 HAUS2Q9NVX0 235 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 R3HDM2Q9Y2K5 976 aaKnown RBP22.72■■□□□ 1.23
BRF1-216ENST00000550208 RAI2Q9Y5P3 530 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.72■■□□□ 1.23
BRF1-216ENST00000550208 DOCK9Q9BZ29 2069 aa22.72■■□□□ 1.23
BRF1-216ENST00000550208 UPK3BL1B0FP48 263 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 UPK3BL2E5RIL1 263 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 NEMP1O14524 444 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 ENC1O14682 589 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 LATO43561 262 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 TSPAN6O43657 245 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 MMP2P08253 660 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 RBP3P10745 1247 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 SEMG2Q02383 582 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 DUOXA1Q1HG43 343 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 ZNF284Q2VY69 593 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 DARS2Q6PI48 645 aaKnown RBP22.71■■□□□ 1.23
BRF1-216ENST00000550208 SLC13A5Q86YT5 568 aaPredicted RBP22.71■■□□□ 1.23
BRF1-216ENST00000550208 SLC35F6Q8N357 371 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 HTR3CQ8WXA8 447 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 TEKT5Q96M29 485 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 CARD9Q9H257 536 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 PCDH12Q9NPG4 1184 aa22.71■■□□□ 1.23
BRF1-216ENST00000550208 RIOK3O14730 519 aaKnown RBP22.7■■□□□ 1.22
BRF1-216ENST00000550208 WNT9AO14904 365 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 KHNYNO15037 678 aaKnown RBP22.7■■□□□ 1.22
BRF1-216ENST00000550208 BCAT2O15382 392 aaPredicted RBP22.7■■□□□ 1.22
BRF1-216ENST00000550208 SOCS5O75159 536 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 GNSP15586 552 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 HOXD12P35452 270 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 CD86P42081 329 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 SUOXP51687 545 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 IRX4P78413 519 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 TRIM61Q5EBN2 209 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 ADAT2Q7Z6V5 191 aaKnown RBP22.7■■□□□ 1.22
BRF1-216ENST00000550208 TTC13Q8NBP0 860 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 CEP76Q8TAP6 659 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 GLOD4Q9HC38 313 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 FSCN3Q9NQT6 498 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 JRKLQ9Y4A0 524 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 PCDHB9Q9Y5E1 797 aa22.7■■□□□ 1.22
BRF1-216ENST00000550208 FAM186AA6NE01 2351 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 PTPRZ1P23471 2315 aaPredicted RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 A0A1B0GTW7 788 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 IGLON5A6NGN9 336 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 SLC31A1O15431 190 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 MTSS1O43312 755 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 MMP20O60882 483 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 PGLSO95336 258 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 CFIP05156 583 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 PDHA1P08559 390 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 CXCR5P32302 372 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 CD68P34810 354 aaPredicted RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 POLR2LP62875 67 aaKnown RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 RPS21P63220 83 aaKnown RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 FAM193AP78312 1265 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 SKOR1P84550 965 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 TMEM52BQ4KMG9 183 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 TMEM259Q4ZIN3 620 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 SLC23A3Q6PIS1 610 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 PID1Q7Z2X4 250 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 CDKL3Q8IVW4 592 aaPredicted RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 KIAA2013Q8IYS2 634 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 ZNF567Q8N184 647 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 GPR161Q8N6U8 529 aaKnown RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 SLC25A51Q9H1U9 297 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 TM9SF3Q9HD45 589 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 SUSD2Q9UGT4 822 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 TPX2Q9ULW0 747 aaKnown RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 SLC6A14Q9UN76 642 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms