RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SLC1A1P43005 524 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 MMP13P45452 471 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 SCNN1BP51168 640 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 HADHBP55084 474 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 CLDN2P57739 230 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 FAM193AP78312 1265 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 TRIP6Q15654 476 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 UGP2Q16851 508 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 MARC1Q5VT66 337 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 TIGD7Q6NT04 549 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ERAP2Q6P179 960 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 DBX2Q6ZNG2 339 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 VSIG1Q86XK7 387 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 OR13H1Q8NG92 308 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 BAHD1Q8TBE0 780 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 RAPGEF5Q92565 580 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ZNF830Q96NB3 372 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 MGME1Q9BQP7 344 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 WRAP53Q9BUR4 548 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 PCDH12Q9NPG4 1184 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ANGPTL2Q9UKU9 493 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 BTBD3Q9Y2F9 522 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ATP8A1Q9Y2Q0 1164 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ARID1BQ8NFD5 2236 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 FPGTO14772 594 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 RAD51BO15315 384 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 SOCS5O75159 536 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 PAK4O96013 591 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 ITGAVP06756 1048 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 MX2P20592 715 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 KDELR1P24390 212 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 NOP2P46087 812 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 RXRGP48443 463 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 SHC2P98077 582 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 FOXC1Q12948 553 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 SHBQ15464 509 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 ODF2Q5BJF6 829 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 PRAMEF14Q5SWL7 426 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 GLRX5Q86SX6 157 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 TMTC1Q8IUR5 882 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 RHOT1Q8IXI2 618 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 PQLC3Q8N755 202 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 RHBDD1Q8TEB9 315 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 ECHDC3Q96DC8 303 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 NUDCD1Q96RS6 583 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 SCUBE2Q9NQ36 999 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 HAUS2Q9NVX0 235 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 HS3ST3A1Q9Y663 406 aa17.38■□□□□ 0.37
CHMP1A-208ENST00000550102 LRP4O75096 1905 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 PTPRBP23467 1997 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 A0A0A6YYK5 440 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 POM121BA6NF01 834 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 SOWAHDA6NJG2 315 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 MMP20O60882 483 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 TM7SF2O76062 418 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 NDUFA10O95299 355 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 RABIFP47224 123 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 GBE1Q04446 702 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 IFI16Q16666 785 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 TMEM52BQ4KMG9 183 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 RALGPS1Q5JS13 557 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 Q6ZSR6 202 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 GATAD2AQ86YP4 633 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 DCP2Q8IU60 420 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 SLC22A18ASQ8N1D0 253 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 PGBD5Q8N414 524 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 SAP25Q8TEE9 199 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 FATE1Q969F0 183 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 RNF157Q96PX1 679 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 KLF6Q99612 283 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 GPR27Q9NS67 375 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 DDX56Q9NY93 547 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 AKAP13Q12802 2813 aa17.37■□□□□ 0.37
CHMP1A-208ENST00000550102 MAP1BP46821 2468 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 C3orf70A6NLC5 250 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 RIOK3O14730 519 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 PSTPIP1O43586 416 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 TRIM16O95361 564 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 MAP3K6O95382 1288 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 FTH1P19P0C7X4 201 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 C6P13671 934 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 ITIH2P19823 946 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 CR2P20023 1033 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 COMTP21964 271 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 CDC25BP30305 580 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 POLR2LP62875 67 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 C11orf63Q6NUN7 778 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 TEX26Q8N6G2 289 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 SPOCK2Q92563 424 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 HDAC11Q96DB2 347 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 TSGA13Q96PP4 275 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 NT5MQ9NPB1 228 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 FTSJ1Q9UET6 329 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 APOBEC2Q9Y235 224 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 HYOU1Q9Y4L1 999 aa17.36■□□□□ 0.37
CHMP1A-208ENST00000550102 A0A1W2PQ67 120 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms