RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ARMC12Q5T9G4 340 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 AGBL4Q5VU57 503 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 FBXL19Q6PCT2 694 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 BRAT1Q6PJG6 821 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 FAM160A2Q8N612 972 aaPredicted RBP21.36■■□□□ 1.01
VPS29-206ENST00000549578 FRMD1Q8N878 549 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 IPMKQ8NFU5 416 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 RUNDC3BQ96NL0 473 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 HDAC8Q9BY41 377 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 NEUROG2Q9H2A3 272 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 VPS45Q9NRW7 570 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 INVSQ9Y283 1065 aa21.36■■□□□ 1.01
VPS29-206ENST00000549578 TTI1O43156 1089 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 FZD6O60353 706 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 CPP00450 1065 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 PRLP01236 227 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 PRKCGP05129 697 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 ADRB3P13945 408 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 TIMP2P16035 220 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 CA4P22748 312 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 NEK3P51956 506 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 GEMP55040 296 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 GPS1Q13098 491 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 MPP3Q13368 585 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 OLIG2Q13516 323 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 USP30Q70CQ3 517 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 TTC7BQ86TV6 843 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 MRGPRX2Q96LB1 330 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 NCKAP1Q9Y2A7 1128 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 AAR2Q9Y312 384 aaKnown RBP21.35■■□□□ 1.01
VPS29-206ENST00000549578 EML5Q05BV3 1969 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 NUMA1Q14980 2115 aa21.35■■□□□ 1.01
VPS29-206ENST00000549578 CCDC163A0A0D9SF12 145 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 ZNF217O75362 1048 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 IGLV3-19P01714 112 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 SP9P0CG40 484 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 ITIH2P19823 946 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FDFT1P37268 417 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 ABL2P42684 1182 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 TERF1P54274 439 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 BASP1P80723 227 aaKnown RBP21.34■■□□□ 1.01
VPS29-206ENST00000549578 CDK18Q07002 472 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 GALNT3Q14435 633 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 UGP2Q16851 508 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 MAP7D1Q3KQU3 841 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 KBTBD6Q86V97 674 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 WDR5BQ86VZ2 330 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 LONP2Q86WA8 852 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 JAMLQ86YT9 394 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 PDCD7Q8N8D1 485 aaKnown RBP21.34■■□□□ 1.01
VPS29-206ENST00000549578 MNS1Q8NEH6 495 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 LPCAT1Q8NF37 534 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 HCAR2Q8TDS4 363 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 PIH1D2Q8WWB5 315 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FAM131CQ96AQ9 280 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 IFT43Q96FT9 208 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 TRIB3Q96RU7 358 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FZD4Q9ULV1 537 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 IGHV1OR15-9A0A0B4J2B8 117 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 CTAGE15A4D2H0 777 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 UPK3BL1B0FP48 263 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 UPK3BL2E5RIL1 263 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 CTAGE8P0CG41 777 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 XPAP23025 273 aaPredicted RBP21.34■■□□□ 1.01
VPS29-206ENST00000549578 ACSL1P33121 698 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 NUBP1P53384 320 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 TAS2R38P59533 333 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 SFSWAPQ12872 951 aaKnown RBP21.34■■□□□ 1.01
VPS29-206ENST00000549578 PTK6Q13882 451 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 DHX34Q14147 1143 aaKnown RBP21.34■■□□□ 1.01
VPS29-206ENST00000549578 SPARCL1Q14515 664 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 C4orf22Q6V702 233 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 CTAGE6Q86UF2 777 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 CTAGE4Q8IX94 777 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 KLHDC8BQ8IXV7 354 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FEM1CQ96JP0 617 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 PPP1R2P1Q96PQ5 205 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 SMIM14Q96QK8 99 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 TRIM51Q9BSJ1 452 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FICDQ9BVA6 458 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 CARD6Q9BX69 1037 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 FSD1LQ9BXM9 530 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 ITM2BQ9Y287 266 aa21.34■■□□□ 1.01
VPS29-206ENST00000549578 A0A1W2PQ67 120 aa21.33■■□□□ 1
VPS29-206ENST00000549578 E7EVH7 732 aa21.33■■□□□ 1
VPS29-206ENST00000549578 RAD51CO43502 376 aa21.33■■□□□ 1
VPS29-206ENST00000549578 AGTP01019 485 aa21.33■■□□□ 1
VPS29-206ENST00000549578 CTPS1P17812 591 aa21.33■■□□□ 1
VPS29-206ENST00000549578 CHRNA4P43681 627 aa21.33■■□□□ 1
VPS29-206ENST00000549578 EPHB1P54762 984 aa21.33■■□□□ 1
VPS29-206ENST00000549578 ADPRHP54922 357 aa21.33■■□□□ 1
VPS29-206ENST00000549578 SEMG2Q02383 582 aa21.33■■□□□ 1
VPS29-206ENST00000549578 SEMA5AQ13591 1074 aa21.33■■□□□ 1
VPS29-206ENST00000549578 PTPRRQ15256 657 aa21.33■■□□□ 1
VPS29-206ENST00000549578 USP39Q53GS9 565 aaKnown RBP21.33■■□□□ 1
VPS29-206ENST00000549578 KCTD11Q693B1 232 aa21.33■■□□□ 1
VPS29-206ENST00000549578 CEP112Q8N8E3 955 aa21.33■■□□□ 1
VPS29-206ENST00000549578 OR14C36Q8NHC7 312 aa21.33■■□□□ 1
VPS29-206ENST00000549578 SPOCK2Q92563 424 aa21.33■■□□□ 1
VPS29-206ENST00000549578 APOL2Q9BQE5 337 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms