RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TMC8Q8IU68 726 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 ENDOVQ8N8Q3 282 aaKnown RBP10.06□□□□□ -0.8
RAB5B-206ENST00000549505 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 CCDC126Q96EE4 140 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 CNDP1Q96KN2 507 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 INSL5Q9Y5Q6 135 aa10.06□□□□□ -0.8
RAB5B-206ENST00000549505 ZFP37Q9Y6Q3 630 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-206ENST00000549505 WDR91A4D1P6 747 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 NT5C1B-RDH14C9J2C7 533 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ITM2AO43736 263 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 MAGEC1O60732 1142 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 HAUS5O94927 633 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 PRLP01236 227 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 KRT16P08779 473 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 FDXRP22570 491 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 KCNJ2P63252 427 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TIAL1Q01085 375 aaKnown RBP eCLIP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 WLSQ5T9L3 541 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 FBXW10Q5XX13 1052 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 WDR75Q8IWA0 830 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 OR52K2Q8NGK3 314 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 GRIN3AQ8TCU5 1115 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 GPR152Q8TDT2 470 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 MAELQ96JY0 434 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 RNF38Q9H0F5 515 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CDH19Q9H159 772 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 UBP1Q9NZI7 540 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 SLC2A6Q9UGQ3 507 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ACOT9Q9Y305 439 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 HTTP42858 3142 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 FAM95CA0A1B0GW59 222 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 F5H423 210 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 FCHO1O14526 889 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 RPP40O75818 363 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 VAPBO95292 243 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 GLDCP23378 1020 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ALDH1A3P47895 512 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CCL23P55773 120 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 BTKQ06187 659 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 VEPH1Q14D04 833 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TAF1AQ15573 450 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CNGA3Q16281 694 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TECRLQ5HYJ1 363 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 LRRC8EQ6NSJ5 796 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TFAP2DQ7Z6R9 452 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 UBE2Q1Q7Z7E8 422 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CMC1Q7Z7K0 106 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 MIB1Q86YT6 1006 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 SREK1Q8WXA9 508 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 NSMCE3Q96MG7 304 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ANKRD27Q96NW4 1050 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 APOL2Q9BQE5 337 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CCDC28BQ9BUN5 200 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 UBA2Q9UBT2 640 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 RAP2CQ9Y3L5 183 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 FGF19O95750 216 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TOP3BO95985 862 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 STMN1P16949 149 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 SERPINB3P29508 390 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CORO1AP31146 461 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 CHRNA4P43681 627 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 MNAT1P51948 309 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 OXCT1P55809 520 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 SATB1Q01826 763 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 RCN2Q14257 317 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 POU6F1Q14863 301 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ACAP2Q15057 778 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 C16orf46Q6P387 395 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 NCEH1Q6PIU2 408 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 L3HYPDHQ96EM0 354 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 TDRD1Q9BXT4 1180 aaKnown RBP10.05□□□□□ -0.8
RAB5B-206ENST00000549505 C11orf49Q9H6J7 331 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
RAB5B-206ENST00000549505 GBF1Q92538 1859 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 MATN2O00339 956 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 INSIG1O15503 277 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 PMPCBO75439 489 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 SERPINF2P08697 491 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 WEE1P30291 646 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 IDH3AP50213 366 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 EPHB3P54753 998 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 IRF9Q00978 393 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 OVGP1Q12889 678 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 DLG1Q12959 904 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 THOC5Q13769 683 aaKnown RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 SNCBQ16143 134 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 FAM45BPQ6NSW5 357 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 DNAJB7Q7Z6W7 309 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 CEP97Q8IW35 865 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 HJURPQ8NCD3 748 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms