RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 METTL25Q8N6Q8 603 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 SCAMP5Q8TAC9 235 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 PABPC5Q96DU9 382 aaKnown RBP11.2□□□□□ -0.62
LINC00661-204ENST00000549354 CERS2Q96G23 380 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 GATA5Q9BWX5 397 aaPredicted RBP11.2□□□□□ -0.62
LINC00661-204ENST00000549354 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 DCDC2Q9UHG0 476 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 FBXW11Q9UKB1 542 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 AURKCQ9UQB9 309 aa11.2□□□□□ -0.62
LINC00661-204ENST00000549354 OR51F1A6NGY5 319 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 HACD1B0YJ81 288 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 AGRPO00253 132 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CCNT2O60583 730 aaKnown RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 GCATO75600 419 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CRTAMO95727 393 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 F9P00740 461 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 IGLV3-25P01717 112 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 UGT1A6P19224 532 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 PIK3R1P27986 724 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ADRA1BP35368 520 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CDKL1Q00532 357 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 DPYSQ14117 519 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 MRPL58Q14197 206 aaKnown RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 MAP7Q14244 749 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 SH2D4BQ5SQS7 431 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 APBB2Q92870 758 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TSNARE1Q96NA8 513 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 KLHL5Q96PQ7 755 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TMEM209Q96SK2 561 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TRIM62Q9BVG3 475 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 C1orf21Q9H246 121 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 H3BSA7 217 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 SYN3O14994 580 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 MAGEB3O15480 346 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CLIC3O95833 236 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 GRIA4P48058 902 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TSPY1Q01534 308 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CLEC6AQ6EIG7 209 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 LILRA2Q8N149 483 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 NPWQ8N729 165 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ELMO2Q96JJ3 720 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 PKP2Q99959 881 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 FRMD8Q9BZ67 464 aaPredicted RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF195O14628 629 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TFAP2AP05549 437 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 BDNFP23560 247 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 YWHAHQ04917 246 aaPredicted RBP11.19□□□□□ -0.62
LINC00661-204ENST00000549354 MPP3Q13368 585 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 PPP1R3AQ16821 1122 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 PGM2L1Q6PCE3 622 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 KLHDC10Q6PID8 442 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 UGT2A3Q6UWM9 527 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ZFP28Q8NHY6 868 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 FAM110BQ8TC76 370 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 ATP6V1E2Q96A05 226 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 SPATA13Q96N96 652 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CASD1Q96PB1 797 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 TKTL2Q9H0I9 626 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 CAAP1Q9H8G2 361 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 RAD54BQ9Y620 910 aa11.19□□□□□ -0.62
LINC00661-204ENST00000549354 MYO15AQ9UKN7 3530 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ANKRD33BA6NCL7 494 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 I6L893 689 aaPredicted RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 GJB3O75712 270 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF189O75820 626 aaPredicted RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 CXCL10P02778 98 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 GALK1P51570 392 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 TBCCQ15814 346 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ESRP1Q6NXG1 681 aaKnown RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 AAGABQ6PD74 315 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 NUP93Q8N1F7 819 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ARHGAP18Q8N392 663 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 EME1Q96AY2 570 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 TMIGD2Q96BF3 282 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 NXNL1Q96CM4 212 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF512Q96ME7 567 aaPredicted RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 CDH19Q9H159 772 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 NMRAL1Q9HBL8 299 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 EGFL7Q9UHF1 273 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ZDHHC2Q9UIJ5 367 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 TANC1Q9C0D5 1861 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 CNTRLQ7Z7A1 2325 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 SHROOM3Q8TF72 1996 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 DCLK1O15075 740 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 GP5P40197 560 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 DPP6P42658 865 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms