RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 GYPCP04921 128 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 CYP1A2P05177 515 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 TPM1P09493 284 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 FAM228BP0C875 321 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 NME1P15531 152 aaKnown RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 NFKBIAP25963 317 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 CASP14P31944 242 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 DUSP3P51452 185 aaPredicted RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 PFN3P60673 137 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 AP1S1P61966 158 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 DAB2P98082 770 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 DPYSQ14117 519 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 PDE1CQ14123 709 aaPredicted RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 TRIM14Q14142 442 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 FZD2Q14332 565 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 PROX2Q3B8N5 592 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 TMEM52BQ4KMG9 183 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 CCDC122Q5T0U0 273 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 POLNQ7Z5Q5 900 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 SRLQ86TD4 932 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 PROSER1Q86XN7 944 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 LRRC49Q8IUZ0 686 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 CACTIN-AS1Q8N1I8 211 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 PAF1Q8N7H5 531 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 NSMCE1Q8WV22 266 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 HSPH1Q92598 858 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 EXOC2Q96KP1 924 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 PSKH2Q96QS6 385 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 NUP85Q9BW27 656 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
BEST3-209ENST00000548658 ZNHIT6Q9NWK9 470 aaKnown RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 RCOR3Q9P2K3 495 aaPredicted RBP11.5□□□□□ -0.57
BEST3-209ENST00000548658 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 SPEGQ15772 3267 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 PTPRBP23467 1997 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 SRRM3A6NNA2 597 aaPredicted RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 TRIM38O00635 465 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 TPP1O14773 563 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 INSIG1O15503 277 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 MMP20O60882 483 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 CAPNS1P04632 268 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 RARAP10276 462 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 IL1R2P27930 398 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 HTR1BP28222 390 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 PEX5P50542 639 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 BLKP51451 505 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 BCL2L1Q07817 233 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 LRRC14Q15048 493 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 AGERQ15109 404 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 RALGPS1Q5JS13 557 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 SPECC1LQ69YQ0 1117 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 CAMK1DQ8IU85 385 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 ARHGAP12Q8IWW6 846 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 NPWQ8N729 165 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 FAM181AQ8N9Y4 354 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 NETO2Q8NC67 525 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 TSEN2Q8NCE0 465 aaKnown RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 ATL2Q8NHH9 583 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 TBATAQ96M53 351 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 CSPG4P5Q96PW8 444 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 XPO4Q9C0E2 1151 aaKnown RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 UVRAGQ9P2Y5 699 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 GGT7Q9UJ14 662 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 ITM2BQ9Y287 266 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 ATP8A1Q9Y2Q0 1164 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 GOLGA4Q13439 2230 aaKnown RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 ARID1BQ8NFD5 2236 aaPredicted RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
BEST3-209ENST00000548658 FRYQ5TBA9 3013 aa11.49□□□□□ -0.57
BEST3-209ENST00000548658 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 FFAR2O15552 330 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SPINT1O43278 529 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 LZTS3O60299 673 aaPredicted RBP11.48□□□□□ -0.57
BEST3-209ENST00000548658 BUB1BO60566 1050 aaPredicted RBP11.48□□□□□ -0.57
BEST3-209ENST00000548658 PIGNO95427 931 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 GP1BAP07359 652 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 H2AFZP0C0S5 128 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 CKMT1AP12532 417 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 JUNDP17535 347 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 AMPD1P23109 780 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SSR1P43307 286 aaKnown RBP11.48□□□□□ -0.57
BEST3-209ENST00000548658 SCNN1BP51168 640 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 CDH6P55285 790 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 KRT81Q14533 505 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 ZNF235Q14590 738 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 ZCCHC8Q6NZY4 707 aaKnown RBP11.48□□□□□ -0.57
BEST3-209ENST00000548658 H2AFVQ71UI9 128 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 MAP7D3Q8IWC1 876 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms