RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 LRRC8AQ8IWT6 810 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 RCOR2Q8IZ40 523 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CNTD1Q8N815 330 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 DENND6BQ8NEG7 585 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 ARRDC2Q8TBH0 407 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 TADA1Q96BN2 335 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 FEM1CQ96JP0 617 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 BRD8Q9H0E9 1235 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 ERVMER34-1Q9H9K5 563 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 GGT7Q9UJ14 662 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 ANKRD6Q9Y2G4 727 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 HS3ST3A1Q9Y663 406 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 ZRANB2O95218 330 aaKnown RBP eCLIP11.03□□□□□ -0.64
GCN1-202ENST00000547263 MAP3K6O95382 1288 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 CCNB1P14635 433 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 GM2AP17900 193 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 TGM2P21980 687 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 HNRNPA2B1P22626 353 aaKnown RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 SERPINA4P29622 427 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 RXRGP48443 463 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 NXPH1P58417 271 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 ELP6Q0PNE2 266 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 PRKD1Q15139 912 aaPredicted RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 SHBQ15464 509 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 TEAD4Q15561 434 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 SLC14A2Q15849 920 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 GCNT7Q6ZNI0 430 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 BBS12Q6ZW61 710 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 KANSL1Q7Z3B3 1105 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 DAAM2Q86T65 1068 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 CAMK1DQ8IU85 385 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 BBS5Q8N3I7 341 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 BAHD1Q8TBE0 780 aaPredicted RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 ALG3Q92685 438 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 CENPTQ96BT3 561 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 RBM41Q96IZ5 413 aaKnown RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 SERAC1Q96JX3 654 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 BMFQ96LC9 184 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 MCCC1Q96RQ3 725 aaPredicted RBP11.03□□□□□ -0.64
GCN1-202ENST00000547263 HERPUD2Q9BSE4 406 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 SLC17A9Q9BYT1 436 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 ATP13A3Q9H7F0 1226 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 NOD2Q9HC29 1040 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 ITM2BQ9Y287 266 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 KNL1Q8NG31 2342 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 LRP4O75096 1905 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 CABIN1Q9Y6J0 2220 aa11.03□□□□□ -0.64
GCN1-202ENST00000547263 A0A1B0GTQ1 180 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 GOLGA6L6A8MZA4 724 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 TLR4O00206 839 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 RAD51BO15315 384 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 PCDHGA12O60330 932 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 DFNA5O60443 496 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 CBFA2T3O75081 653 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 CER1O95813 267 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 HLA-DQB2P05538 268 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 MMP2P08253 660 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 ITIH2P19823 946 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 CES1P23141 567 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 MAT2AP31153 395 aaKnown RBP11.02□□□□□ -0.65
GCN1-202ENST00000547263 SCNN1BP51168 640 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 PFN3P60673 137 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 BCL2L1Q07817 233 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 KIF5AQ12840 1032 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 TRAF2Q12933 501 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 TFDP2Q14188 446 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 ZNF235Q14590 738 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 PDK1Q15118 436 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 HLA-BQ31612 363 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 NPNTQ6UXI9 565 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 KYAT3Q6YP21 454 aaKnown RBP11.02□□□□□ -0.65
GCN1-202ENST00000547263 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 CCDC13Q8IYE1 715 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 RYBPQ8N488 228 aaPredicted RBP11.02□□□□□ -0.65
GCN1-202ENST00000547263 TP53I13Q8NBR0 393 aaPredicted RBP11.02□□□□□ -0.65
GCN1-202ENST00000547263 OR2I1PQ8NGU4 316 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 PIH1D2Q8WWB5 315 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 SNX19Q92543 992 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 IFT43Q96FT9 208 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 HES6Q96HZ4 224 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 LGMNQ99538 433 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 POLR1EQ9GZS1 481 aaKnown RBP11.02□□□□□ -0.65
GCN1-202ENST00000547263 IL21RQ9HBE5 538 aa11.02□□□□□ -0.65
GCN1-202ENST00000547263 PCDH12Q9NPG4 1184 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms