RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ACOX2Q99424 681 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 NAT9Q9BTE0 207 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 IL22Q9GZX6 179 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 NEUROG2Q9H2A3 272 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CHKBQ9Y259 395 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 WASF2Q9Y6W5 498 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 MAGEB16A2A368 324 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 SDR42E2A6NKP2 422 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 SHISA7A6NL88 538 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 E7ESA3 106 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 TRAFD1O14545 582 aaPredicted RBP15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 FZD6O60353 706 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 ATG13O75143 517 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 RNF40O75150 1001 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 USP12O75317 370 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 LEFTY1O75610 366 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 MAGEA3P43357 314 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 GRIA4P48058 902 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 CCDC15Q0P6D6 951 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 PDIA2Q13087 525 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 BBS9Q3SYG4 887 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 ZNF805Q5CZA5 627 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 ZNF534Q76KX8 674 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 KDELC2Q7Z4H8 507 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 RELL1Q8IUW5 271 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 SIX5Q8N196 739 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 STK40Q8N2I9 435 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 ZNF366Q8N895 744 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 CHST14Q8NCH0 376 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 HNRNPLLQ8WVV9 542 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 APOL2Q9BQE5 337 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 OSBPL6Q9BZF3 934 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 LTB4R2Q9NPC1 389 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 PRSS16Q9NQE7 514 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 HACD3Q9P035 362 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 SAMD15Q9P1V8 674 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 DKK3Q9UBP4 350 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 PCDHB9Q9Y5E1 797 aa15.96■□□□□ 0.15
TRAFD1-203ENST00000547063 KRBA1A5PL33 1030 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 ANKRD66B4E2M5 251 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 PIGNO95427 931 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CPP00450 1065 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 UGT2B4P06133 528 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 MYBL2P10244 700 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CHRM1P11229 460 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 HOXB2P14652 356 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CD72P21854 359 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 GRIA1P42261 906 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SUOXP51687 545 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SESN2P58004 480 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SFSWAPQ12872 951 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 IHHQ14623 411 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 UBXN2BQ14CS0 331 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CCDC38Q502W7 563 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 ARSIQ5FYB1 569 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SIRPB2Q5JXA9 342 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 FNBP1LQ5T0N5 605 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 DENND5AQ6IQ26 1287 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SLC25A41Q8N5S1 370 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 TXNDC5Q8NBS9 432 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 LPCAT1Q8NF37 534 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 GRIN3AQ8TCU5 1115 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 AENQ8WTP8 325 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 PTCD2Q8WV60 388 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CAVIN3Q969G5 261 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 ECHDC3Q96DC8 303 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 TTC25Q96NG3 672 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 SAYSD1Q9NPB0 183 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 DYRK4Q9NR20 520 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 MUTYHQ9UIF7 546 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 PPM1HQ9ULR3 514 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 MMP17Q9ULZ9 603 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 PHTF1Q9UMS5 762 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 CKAP5Q14008 2032 aa15.95■□□□□ 0.14
TRAFD1-203ENST00000547063 TSPAN11A1L157 253 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 CHURC1-FNTBB4DL54 471 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 ADH1BP00325 375 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 PRLP01236 227 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 ATXN1LP0C7T5 689 aaKnown RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 CHRNB1P11230 501 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 XPAP23025 273 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 GKP32189 559 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 WASP42768 502 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 ZXDAP98168 799 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 DHX9Q08211 1270 aaKnown RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 PCID2Q5JVF3 399 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 ZNF776Q68DI1 518 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 USP45Q70EL2 814 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 TRMT10CQ7L0Y3 403 aaKnown RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 NLRP9Q7RTR0 991 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 GSPT2Q8IYD1 628 aaKnown RBP15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 ZBED8Q8IZ13 594 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 OR2T3Q8NH03 318 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 RPLP0P6Q8NHW5 317 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 PIP4K2CQ8TBX8 421 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 PYROXD1Q8WU10 500 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 NSMCE3Q96MG7 304 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 KLHL32Q96NJ5 620 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 FAM129BQ96TA1 746 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 RSPH9Q9H1X1 276 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms