RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 A0A1W2PQ67 120 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 IGLON5A6NGN9 336 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 FPGTO14772 594 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 MUSKO15146 869 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 SOCS5O75159 536 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 TRIM16O95361 564 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 PAK4O96013 591 aaPredicted RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 CR2P20023 1033 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 GARSP41250 739 aaKnown RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 SCNN1BP51168 640 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 SHC2P98077 582 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 IL9RQ01113 521 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 SHBQ15464 509 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 SPA17Q15506 151 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 TMEM52BQ4KMG9 183 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 LRRC73Q5JTD7 316 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 MARC1Q5VT66 337 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 TIGD7Q6NT04 549 aaPredicted RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 CAMK1DQ8IU85 385 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 TMTC1Q8IUR5 882 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 OR13H1Q8NG92 308 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 RHBDD1Q8TEB9 315 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 SAP25Q8TEE9 199 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 FATE1Q969F0 183 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 ECHDC3Q96DC8 303 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 NUDCD1Q96RS6 583 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 MGME1Q9BQP7 344 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 C1QTNF7Q9BXJ2 289 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 GPR27Q9NS67 375 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 HAUS2Q9NVX0 235 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 ARID1BQ8NFD5 2236 aaPredicted RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 CHD8Q9HCK8 2581 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 A0A0A6YYK5 440 aaPredicted RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 LRRD1A4D1F6 860 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 TM7SF2O76062 418 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 ITGAVP06756 1048 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 MX2P20592 715 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 MMP12P39900 470 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 MMP13P45452 471 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 RABIFP47224 123 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 POLR2LP62875 67 aaKnown RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 FAM193AP78312 1265 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 IFI16Q16666 785 aaKnown RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 RAPGEF5Q92565 580 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 IFT43Q96FT9 208 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 RNF157Q96PX1 679 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 KLF6Q99612 283 aaPredicted RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 PCDH12Q9NPG4 1184 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 DDX56Q9NY93 547 aaKnown RBP16.03■□□□□ 0.16
DDX54-204ENST00000546898 AMACRQ9UHK6 382 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 ATP8A1Q9Y2Q0 1164 aa16.03■□□□□ 0.16
DDX54-204ENST00000546898 CFAP69A5D8W1 941 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 TRAFD1O14545 582 aaPredicted RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 TOR1BO14657 336 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 RAD51BO15315 384 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 SPOPO43791 374 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 MMP20O60882 483 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 IPO7O95373 1038 aaKnown RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 KRT1P04264 644 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 CCNCP24863 283 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 CDC25BP30305 580 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 CLDN2P57739 230 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 FOXC1Q12948 553 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 ODF2Q5BJF6 829 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 ZSWIM9Q86XI8 627 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 TEX26Q8N6G2 289 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 PAF1Q8N7H5 531 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 MAML1Q92585 1016 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 BMFQ96LC9 184 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 TSGA13Q96PP4 275 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 SCUBE2Q9NQ36 999 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 APOBEC2Q9Y235 224 aaKnown RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 PCDHA13Q9Y5I0 950 aa16.02■□□□□ 0.16
DDX54-204ENST00000546898 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.16
DDX54-204ENST00000546898 POM121BA6NF01 834 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 MATN3O15232 486 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 PSTPIP1O43586 416 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 NDUFA10O95299 355 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 NFKBIAP25963 317 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 NOP2P46087 812 aaKnown RBP16.01■□□□□ 0.15
DDX54-204ENST00000546898 AGERQ15109 404 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 SLC9A4Q6AI14 798 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 Q6ZSR6 202 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 GATAD2AQ86YP4 633 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 SLC22A18ASQ8N1D0 253 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.01■□□□□ 0.15
DDX54-204ENST00000546898 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
DDX54-204ENST00000546898 HDAC11Q96DB2 347 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms