RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 PRCCQ92733 491 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 EXTL1Q92935 676 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 PCED1BQ96HM7 432 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF560Q96MR9 790 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 SYT15Q9BQS2 421 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CARD6Q9BX69 1037 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 BBS2Q9BXC9 721 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 XPO4Q9C0E2 1151 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 IKZF4Q9H2S9 585 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CXorf56Q9H5V9 222 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 POLR1BQ9H9Y6 1135 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 C17orf75Q9HAS0 396 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 TRMT1Q9NXH9 659 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 PPP2R2CQ9Y2T4 447 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 UNC13CQ8NB66 2214 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 PP2D1A8MPX8 630 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 TRIM38O00635 465 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 HNRNPDLO14979 420 aaKnown RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CHUKO15111 745 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 DFNA5O60443 496 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CUTAO60888 179 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 USP12O75317 370 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CSO75390 466 aaKnown RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 FSBPO95073 299 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 FUCA1P04066 466 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 OR52Z1P0C646 297 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 RNF224P0DH78 156 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ABCB4P21439 1286 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 LMO2P25791 158 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ACOT2P49753 483 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 MFAP3P55082 362 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 UBASH3AP57075 661 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CKAP4Q07065 602 aaKnown RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 IFFO1Q0D2I5 559 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 TBX2Q13207 712 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ESPL1Q14674 2120 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 NR1I3Q14994 352 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 IGFBP7Q16270 282 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SOWAHAQ2M3V2 549 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 YOD1Q5VVQ6 348 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 TMEM215Q68D42 235 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 TPGS1Q6ZTW0 290 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CD302Q8IX05 232 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 FAM26EQ8N5C1 309 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 POU5F2Q8N7G0 328 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 RCBTB1Q8NDN9 531 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ERMNQ8TAM6 284 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SORCS1Q8WY21 1168 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 IQCDQ96DY2 449 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 CEP295NLQ96MC4 621 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 BAG1Q99933 345 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 MMTAG2Q9BU76 263 aaKnown RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 MSTO1Q9BUK6 570 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ACE2Q9BYF1 805 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 LHX5Q9H2C1 402 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ASB7Q9H672 318 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 THSD1Q9NS62 852 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 PLK2Q9NYY3 685 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 IFNKQ9P0W0 207 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 PLEKHB1Q9UF11 243 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SERGEFQ9UGK8 458 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SIX4Q9UIU6 781 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SATB2Q9UPW6 733 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 SLC27A6Q9Y2P4 619 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 U3KQA8 63 aa6.87□□□□□ -1.31
CCDC60-205ENST00000546345 RP1L1Q8IWN7 2480 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-205ENST00000546345 ITIH6Q6UXX5 1313 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 PCNX1Q96RV3 2341 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 TRBV23-1A0A0A0MS06 115 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 A0A1B0GVM2 712 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 A0A1W2PPC4 97 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CTAGE15A4D2H0 777 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CTAGE9A4FU28 777 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 VWA3AA6NCI4 1184 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ANKRD63C9JTQ0 380 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 GOLGA8KD6RF30 607 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CASC3O15234 703 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 OPA1O60313 960 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SERPINC1P01008 464 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 PENKP01210 267 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CYBBP04839 570 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ITGB3P05106 788 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ZDHHC11BP0C7U3 371 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CTAGE8P0CG41 777 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 GIMD1P0DJR0 217 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 WT1P19544 449 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ME1P48163 572 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms