RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TBC1D3HP0C7X1 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 CD86P42081 329 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 DHPSP49366 369 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 SKOR1P84550 965 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 UGP2Q16851 508 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 LONRF2Q1L5Z9 754 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 CFAP58Q5T655 872 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3GQ6DHY5 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3CQ6IPX1 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 ARMCX6Q7L4S7 300 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3Q8IZP1 549 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 COG1Q8WTW3 980 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 C1orf54Q8WWF1 131 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 MS4A14Q96JA4 679 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 NAPGQ99747 312 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 KLHL8Q9P2G9 620 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TRHDEQ9UKU6 1024 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 ZKSCAN5Q9Y2L8 839 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 AREL1O15033 823 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 FANCGO15287 622 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 EPN2O95208 641 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 IGHV4-34P06331 123 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 SUOXP51687 545 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 OASLQ15646 514 aaKnown RBP20.64■□□□□ 0.9
HMGA2-211ENST00000545998 LRRC73Q5JTD7 316 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 PAPD7Q5XG87 772 aaKnown RBP20.64■□□□□ 0.9
HMGA2-211ENST00000545998 LYSMD4Q5XG99 296 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 KIAA0895LQ68EN5 471 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 PRPF39Q86UA1 669 aaKnown RBP20.64■□□□□ 0.9
HMGA2-211ENST00000545998 TADA1Q96BN2 335 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 BIRC7Q96CA5 298 aa20.64■□□□□ 0.9
HMGA2-211ENST00000545998 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.64■□□□□ 0.9
HMGA2-211ENST00000545998 A0A1W2PQ67 120 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PRR23AA6NEV1 266 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 UPK3BL1B0FP48 263 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 UPK3BL2E5RIL1 263 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 FZD6O60353 706 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PGLSO95336 258 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 CCR5P51681 352 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PPP2CBP62714 309 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 POLR2LP62875 67 aaKnown RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PPP2CAP67775 309 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 NEK5Q6P3R8 708 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PID1Q7Z2X4 250 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PDCD6IPQ8WUM4 868 aaKnown RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 TMEM121Q9BTD3 319 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 TDRD1Q9BXT4 1180 aaKnown RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PCDH12Q9NPG4 1184 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 GGT7Q9UJ14 662 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 ITM2BQ9Y287 266 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PCDHB9Q9Y5E1 797 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 LRRK1Q38SD2 2015 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 FAM186AA6NE01 2351 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 CTAGE9A4FU28 777 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 CFAP69A5D8W1 941 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 MEI4A8MW99 385 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 STK10O94804 968 aaKnown RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 FSBPO95073 299 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 RETP07949 1114 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 PRLRP16471 622 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 TCP1P17987 556 aaKnown RBP20.63■□□□□ 0.89
HMGA2-211ENST00000545998 ITIH2P19823 946 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 NFKB1P19838 968 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 ITPKAP23677 461 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 SLC14A2Q15849 920 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 CCNG2Q16589 344 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 ARMC12Q5T9G4 340 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 TRIM69Q86WT6 500 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 FAM71DQ8N9W8 422 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 SPATA22Q8NHS9 363 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 ACTRT1Q8TDG2 376 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 DNASE2BQ8WZ79 361 aa20.63■□□□□ 0.89
HMGA2-211ENST00000545998 C5orf60A6NFR6 353 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 ZNF185O15231 689 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 LATO43561 262 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 TSPAN6O43657 245 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 RNGTTO60942 597 aaKnown RBP20.62■□□□□ 0.89
HMGA2-211ENST00000545998 PCDH8O95206 1070 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 CPP00450 1065 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 PDHA1P08559 390 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 CA4P22748 312 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 XPAP23025 273 aaPredicted RBP20.62■□□□□ 0.89
HMGA2-211ENST00000545998 SNX1Q13596 522 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 ANKRD20A2Q5SQ80 823 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 SYCP2LQ5T4T6 812 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 ANKRD20A1Q5TYW2 823 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 ANKRD20A3Q5VUR7 823 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 DRICH1Q6PGQ1 229 aaPredicted RBP20.62■□□□□ 0.89
HMGA2-211ENST00000545998 CYP2U1Q7Z449 544 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 PIH1D2Q8WWB5 315 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 SPATA13Q96N96 652 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 FCRL5Q96RD9 977 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 GBA3Q9H227 469 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 TPX2Q9ULW0 747 aaKnown RBP20.62■□□□□ 0.89
HMGA2-211ENST00000545998 ZFR2Q9UPR6 939 aaKnown RBP20.62■□□□□ 0.89
HMGA2-211ENST00000545998 PCDHGA5Q9Y5G8 931 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 CACNA1EQ15878 2313 aa20.62■□□□□ 0.89
HMGA2-211ENST00000545998 PLXNA2O75051 1894 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms