RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HS1BP3Q53T59 392 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 C19orf48Q6RUI8 117 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 PSTKQ8IV42 348 aaKnown RBP21.33■■□□□ 1.01
SCARB1-210ENST00000545493 FAM181AQ8N9Y4 354 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 TSEN2Q8NCE0 465 aaKnown RBP21.33■■□□□ 1.01
SCARB1-210ENST00000545493 SUV39H2Q9H5I1 410 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 SP110Q9HB58 689 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 PCDH12Q9NPG4 1184 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 CWC15Q9P013 229 aaKnown RBP21.33■■□□□ 1.01
SCARB1-210ENST00000545493 A0A1W2PQJ5 194 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 DFFAO00273 331 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 MUSKO15146 869 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 DAPK3O43293 454 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 C6P13671 934 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 JUNDP17535 347 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 PCK1P35558 622 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 MMP12P39900 470 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 ELP6Q0PNE2 266 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 DPYSL2Q16555 572 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 UGP2Q16851 508 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 COL28A1Q2UY09 1125 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 CAMK1DQ8IU85 385 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 DCBLD1Q8N8Z6 715 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 HCAR2Q8TDS4 363 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 DUSP23Q9BVJ7 150 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 MRPL47Q9HD33 250 aaKnown RBP21.32■■□□□ 1
SCARB1-210ENST00000545493 IPO11Q9UI26 975 aaKnown RBP21.32■■□□□ 1
SCARB1-210ENST00000545493 CLCA2Q9UQC9 943 aa21.32■■□□□ 1
SCARB1-210ENST00000545493 AQP9O43315 295 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 PRKCGP05129 697 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 SUOXP51687 545 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 GRM3Q14832 879 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 MACC1Q6ZN28 852 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 NSMCE3Q96MG7 304 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 TUBGCP5Q96RT8 1024 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 LRRC61Q9BV99 259 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 CINPQ9BW66 212 aaPredicted RBP21.31■■□□□ 1
SCARB1-210ENST00000545493 ETNK2Q9NVF9 386 aa21.31■■□□□ 1
SCARB1-210ENST00000545493 APOBEC3BQ9UH17 382 aaKnown RBP21.31■■□□□ 1
SCARB1-210ENST00000545493 NEMP2A6NFY4 417 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 RIOK3O14730 519 aaKnown RBP21.3■■□□□ 1
SCARB1-210ENST00000545493 PALMO75781 387 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 XPAP23025 273 aaPredicted RBP21.3■■□□□ 1
SCARB1-210ENST00000545493 CSNK1DP48730 415 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 HCAR3P49019 387 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 ZNF135P52742 658 aaPredicted RBP21.3■■□□□ 1
SCARB1-210ENST00000545493 THOP1P52888 689 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 YPEL5P62699 121 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 SEMG2Q02383 582 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 IL10RBQ08334 325 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 DEFB133Q30KQ1 61 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 CDCP2Q5VXM1 449 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 TXNRD3NBQ6F5E7 133 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 ZCCHC8Q6NZY4 707 aaKnown RBP21.3■■□□□ 1
SCARB1-210ENST00000545493 BRAT1Q6PJG6 821 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 SRLQ86TD4 932 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 PHACTR4Q8IZ21 702 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 CACTIN-AS1Q8N1I8 211 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 LMX1AQ8TE12 382 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 ECHDC3Q96DC8 303 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 BTBD6Q96KE9 485 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 ZNF641Q96N77 438 aaPredicted RBP21.3■■□□□ 1
SCARB1-210ENST00000545493 C1QTNF7Q9BXJ2 289 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 NRSN2Q9GZP1 204 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 THAP2Q9H0W7 228 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 SCUBE2Q9NQ36 999 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.3■■□□□ 13e-8■□□□□ 10.2
SCARB1-210ENST00000545493 ATP8A1Q9Y2Q0 1164 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 CSNK1G3Q9Y6M4 447 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 KNTC1P50748 2209 aa21.3■■□□□ 1
SCARB1-210ENST00000545493 CACNA1GO43497 2377 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 TLX3O43711 291 aaPredicted RBP21.29■■□□□ 1
SCARB1-210ENST00000545493 MT-CO3P00414 261 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 E2F1Q01094 437 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 SLC25A11Q02978 314 aaKnown RBP21.29■■□□□ 1
SCARB1-210ENST00000545493 RALGDSQ12967 914 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 PTK2BQ14289 1009 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 RFTN1Q14699 578 aaPredicted RBP21.29■■□□□ 1
SCARB1-210ENST00000545493 RTP5Q14D33 572 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 WSCD2Q2TBF2 565 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 CFAP58Q5T655 872 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 ERAP2Q6P179 960 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 HSPH1Q92598 858 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 SYN2Q92777 582 aaPredicted RBP21.29■■□□□ 1
SCARB1-210ENST00000545493 ATP13A3Q9H7F0 1226 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 ZWILCHQ9H900 591 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 USP29Q9HBJ7 922 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 PCDHB1Q9Y5F3 818 aa21.29■■□□□ 1
SCARB1-210ENST00000545493 A0A087WV48 116 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 H3BRJ5 948 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 GCATO75600 419 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 GYPCP04921 128 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 GP1BAP07359 652 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 CELA2BP08218 269 aaPredicted RBP21.28■■□□□ 1
SCARB1-210ENST00000545493 HOXB3P14651 431 aaPredicted RBP21.28■■□□□ 1
SCARB1-210ENST00000545493 SERPINA4P29622 427 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 EIF4A3P38919 411 aaKnown RBP21.28■■□□□ 1
SCARB1-210ENST00000545493 LIG3P49916 1009 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 UBASH3AP57075 661 aa21.28■■□□□ 1
SCARB1-210ENST00000545493 TPM4P67936 248 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms